Oryza brachyantha (malo sina): 33018013 Help Entry 33018013          CDS       T02995                                  Symbol rpoB, BBW32_gp074 Name (RefSeq) RNA polymerase beta subunit   KO K03043   DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] Organism obr  Oryza brachyantha (malo sina) Pathway obr03020   RNA polymerase Brite KEGG Orthology (KO) [BR:obr00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     33018013 (rpoB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:obr03021]     33018013 (rpoB)    03400 DNA repair and recombination proteins [BR:obr03400]     33018013 (rpoB) Enzymes [BR:obr01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      33018013 (rpoB) Transcription machinery [BR:obr03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      33018013 (rpoB) DNA repair and recombination proteins [BR:obr03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       33018013 (rpoB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_1 RNA_pol_Rpb2_45 Motif Other DBs NCBI-GeneID:  33018013 NCBI-ProteinID:  YP_009266412 UniProt:  A0A1W5I138 LinkDB All DBs Position Pltd:19614..22841 Genome browser AA seq 1075 aa AA seqDB search MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPDHEIAFQLFAKGYQLL EPPIKERDAVYESLTYSSELYVSARLIFGFDVQKQTISIGNIPIMNSLGTFIINGIYRIV INQILLSPGIYYRSELDHKGISIYTGTIISDWGGRSELAIDKKERIWARVSRKQKISILV LSSAMGSNLKEILDNVSYPEIFLSFPNAKEKKRIESKEKAILEFYQQFACVGGDLVFSES LCEELQKKFFQQKCELGRIGRRNMNRRLNLDIPQNSTFLLPRDVLAATDHLIGMKFGTGI LDDDDMNHLKNKRIRSVADLLQDQFGLALGRLQHAVQKTIRRVFIRQSKPTPQTLVTPTS TSILLITTYETFFGTYPLSQVFDQTNPLTQTVHGRKVSCLGPGGLTGRTASFRSRDIHPS HYGRICPIDTSEGINVGLTGSLAIHARIDHWWGSVKSPFYEISEKAKNKKERQVVYLSPN RDEYYMIAAGNSLSLNRGIQEEQVVPARYRQEFLTIAWEQIHVRSIFPFQYFSIGGSLIP FIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSRVSVIAEREGKIISTDS HKILLSSSGKTISIPLVTHRRSNKNTCMHQKPRVPRGKSIKKGQILAEGAATVGGELALG KNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTDTTSQGSAEKITKEIPH LEEHLLRNLDRNGVVKLGSWVETGDILVGKLTPQIASESSYIAEAGLLRAIFGLEVSTSK ETSLKLPIGGRGRVIDVKWIQRDPLDIMVRVYILQKREIKVGDKVAGRHGNKGIISKILP RQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFESSLGLAGDLLKKHYRIAPFDERYEQEA SRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVD EKIHGRSTGPYSLVTQQPVRGRAKQGGQRIGEMEVWALEGFGVAHILQEILTYKSDHLIA RQEILNATIWGKRVPNHEDPPESFRVLVRELRSLALELNHFLVSQKNFQVNREEV NT seq 3228 nt NT seq  +upstreamnt  +downstreamnt atgctccggaatggaaatgagggaatgtccacaatacccggatttagtcagatccaattc gagggattttgtaggttcattaatcaaggcttggcagaagaacttgagaagtttccaaca attaaagatccagatcacgaaattgcatttcaattatttgcgaaaggatatcaattgcta gaacctccgataaaagaaagggatgctgtgtatgaatcactcacctattcttccgaatta tacgtatccgcgcgattaattttcggtttcgatgtgcaaaagcaaaccatttctattgga aacattcctataatgaattccttaggaacctttataataaatggaatataccgaattgtg atcaatcaaatattgctaagtcccggtatttactaccgctcggaattagaccataaggga atttctatctacaccgggactataatatcagattggggaggaagatcggaattagcaatt gataaaaaagaaaggatatgggctcgcgtgagtagaaaacaaaagatatctattctagtt ctatcatcagctatgggttcgaatctaaaagaaattctagataatgtttcctaccctgaa attttcttgtctttcccaaatgctaaggagaagaagaggattgagtcaaaagaaaaagct attttggagttttatcaacaatttgcttgtgtaggcggggacctggtattttcggaatcc ttatgtgaggaattacaaaagaaattttttcaacaaaaatgtgaattaggaaggattggt cgacgaaatatgaatcgaagactgaatcttgatatacctcagaacagcaccttcttgtta ccgcgagatgtattggccgctacggatcatttgattggaatgaaatttggaacgggtata cttgacgatgacgatatgaatcacttgaaaaataaacgtattcgttcggttgcggatctg ttacaagatcaattcggactggctcttggtcgtttacaacatgcggttcaaaaaactatc cgtagagtattcatacgtcaatcgaaaccgactccacaaactttggtaactccaacttca acctcgattttattaataactacttatgagaccttctttggtacataccctttatctcaa gtttttgatcaaaccaatccattgacacaaactgttcatgggcgaaaagtgagttgtttg ggtcctggaggattgacggggagaactgcaagttttcggagccgagatatccatccgagc cactatgggcgtatttgtccaattgacacgtccgaaggaatcaacgttggacttactgga tctttagctattcatgcgagaattgatcactggtggggatccgtaaagagtccgttttat gaaatatctgagaaagcaaaaaacaaaaaagagagacaggtggtttatttatcaccaaat agagatgaatattatatgatagcagcaggaaattctttgtccttgaatcggggtattcag gaagaacaggttgttccagctagataccgtcaagaattcctgactattgcatgggaacag attcatgttagaagtatttttcctttccaatatttttctattgggggttctctcattcct tttattgaacataatgatgcgaatcgagctttaatgagttctaatatgcagcgccaagca gttccgctttctcggtccgagaagtgcattgttggaactggattggaacgccaaacagct ctagattcgagggtttctgttatagccgaacgcgagggaaagatcatttctactgatagt cacaaaatccttttatcaagtagtgggaagactataagtattcctttagttacccatcgg cgctctaacaaaaatacttgtatgcaccaaaaacctcgggttccgcggggtaaatccatt aaaaaaggacaaattttagcggagggggctgctacagttggtggggaacttgctttagga aaaaacgtattagtagcttatatgccatgggaaggttacaattttgaagacgcagtatta attagcgaacgtttggtatatgaggatatttatacttcttttcacatccgaaaatatgaa attcagacggatacgacaagccaaggctccgctgaaaaaatcactaaagaaataccacat ctagaagaacatttactccgcaatttggacagaaatggagttgtgaagttggggtcctgg gtagaaacaggcgatattttagtaggtaaattaacgcctcagatagcgagcgaatcgtcc tatatcgcggaagctggattattacgggccatatttggtcttgaggtatccacttcaaaa gaaacttctctcaaactaccaataggtggaagagggcgcgttatcgatgtgaaatggatc cagagggatcccctcgacataatggttcgtgtatatattttacaaaaacgcgaaatcaaa gttggggataaagtagccggaagacacgggaataaggggatcatttccaaaattttgcct aggcaagatatgccctatttgcaagatggaacgcctgttgatatggttttcaatccctta ggagtaccctcccgaatgaatgtgggacaaatatttgaaagctcgctcggtttagcaggg gatctgctaaagaaacattatagaatagcaccctttgatgagagatatgagcaagaggct tcaagaaaacttgtgttttcagaattatatgaagccagtaaacaaacaaaaaatccgtgg gtatttgaacccgagtacccgggaaaaagcagaatatttgatggaagaacaggagacccc ttcgaacagcctgttctaatagggaagtcctatatcttaaaattaattcatcaagttgat gagaaaatccacggacgctctactgggccctattcacttgttacacaacaacccgttaga ggaagagccaagcaagggggacaacgaataggagaaatggaagtttgggctttagaagga tttggtgttgctcatattttacaagagatacttacttataaatctgatcatcttatagct cgccaagaaatacttaacgctacgatctggggaaaacgagtacctaatcacgaggatcct ccagaatcttttcgagtgctcgttcgagaactacgatctttggctctagaactgaaccat tttcttgtatctcagaaaaacttccaggttaatagggaagaagtttga

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