Opitutaceae bacterium TAV5: OPIT5_19205
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Entry
OPIT5_19205 CDS
T03683
Name
(GenBank) transcriptional regulator
KO
K02103
GntR family transcriptional regulator, arabinose operon transcriptional repressor
Organism
obt
Opitutaceae bacterium TAV5
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obt03000
]
OPIT5_19205
Transcription factors [BR:
obt03000
]
Prokaryotic type
Helix-turn-helix
GntR family
OPIT5_19205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
GntR
Peripla_BP_4
HTH_24
HTH_11
HTH_29
HTH_DeoR
MarR_2
HTH_36
HTH_41
HTH_27
5-FTHF_cyc-lig
Peripla_BP_6
HTH_Crp_2
HTH_IclR
RP-C
HTH_28
PaaX
Motif
Other DBs
NCBI-ProteinID:
AHF92038
UniProt:
W0J4Y1
LinkDB
All DBs
Position
complement(4505082..4506203)
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AA seq
373 aa
AA seq
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MIMDPSTELRNIDEATRYQAAKNMLRRKVLSGEVGHGEQLQPELELCREINLSRTTVRKA
IADLVNEGLLVRYRGRGTFVNIRRSPVQKKLLALLLCQAANVSGAYDLLTQGARQAASKL
GYQLLLANSQNEEQAALSQAIMLNEHKVAGTIVVPLQTPAPDVSTEQVIRALVRTGQKVI
MADGYSGSDDVPSVCSQNREAMYTLTSHLIARGYRRIAFLTSYRVEVVQEREDGFRRAMA
EHGLEIPPEYFLEVGSRDPARQGIQEVDVFMAMRKRPEAIVCLHDLIALNVIRRCEERGW
SVPRDVAVTGFDDLPQAARSDPPLTTMHQPLRALGTRAVELLVQCLREEPLPVLHERLPC
RLIVRQSCGSSSA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggatccatccaccgaactccggaatatcgacgaggccacccgctatcaggcg
gccaaaaacatgctgcgccgcaaggtcctgagcggcgaggtcgggcatggcgagcaactc
cagcccgagctcgaactgtgccgcgagatcaatctctcgcgcaccaccgtgcgcaaggcc
atcgccgatctcgtcaacgaagggctgctcgtgcgttatcgcggacgcggcacgtttgtg
aacatccgccgttctcccgtgcagaaaaagctgctcgcgctgctcctctgccaggccgcc
aacgtttccggcgcctacgacctgctgacccagggcgcgcgccaggccgcctcgaaactc
ggctaccagcttctcctcgccaactcgcagaacgaggaacaggccgcgctctcgcaggcg
atcatgctcaacgaacacaaggtcgccggcacgatcgtcgtgccgctccagactcccgcc
ccggatgtctccaccgaacaggtcattcgcgccttggtgcgcaccggccagaaagtgatc
atggccgacgggtattcgggcagcgacgacgttcccagcgtatgcagccagaaccgcgag
gcgatgtacacgctcaccagccatctgattgcccgcggctaccgtcgcatcgccttcctc
acgagttaccgcgtcgaggttgtccaggaacgcgaagacggtttccggcgggcgatggcg
gagcacggactggaaatcccgccggagtattttcttgaagtcggcagccgcgatcccgcg
cggcagggcatccaggaagtcgatgtctttatggccatgcgcaagcgcccggaagcgatc
gtatgcctgcatgatctgatcgcgctcaatgtcatccggcgctgtgaagaacgcggctgg
agcgtgccgcgcgatgtggcggtcaccggcttcgacgatctcccgcaggcggcaagatcg
gatccgccgctcaccaccatgcaccagcctctcagggcgctcggcacccgcgccgtcgaa
ttgctcgtccagtgcctgcgcgaagagccgctgcccgtccttcacgaacgcctgccctgc
cggttgattgtccgccagtcctgcgggtcctcttccgcctga
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