Afipia carboxidovorans OM5 (Mississippi): OCAR_7356
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Entry
OCAR_7356 CDS
T00783
Name
(GenBank) peptidase family M20/M25/M40
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00300
Lysine biosynthesis
oca01100
Metabolic pathways
oca01120
Microbial metabolism in diverse environments
oca01230
Biosynthesis of amino acids
Module
oca_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
OCAR_7356
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oca01002
]
OCAR_7356
Enzymes [BR:
oca01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
OCAR_7356
Peptidases and inhibitors [BR:
oca01002
]
Metallo peptidases
Family M20
OCAR_7356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
ACI94459
LinkDB
All DBs
Position
complement(3312794..3314014)
Genome browser
AA seq
406 aa
AA seq
DB search
MAMTEEQTFLDKIDAEISAERDNLIAFCGRLVREPSESPPGETLGVSKVVQAYLGEHGVA
SEVVACDPNAPNLVAHLGEGAGRHIVYNAHMDTMRPGDESCWSVPILELTRKDGRLYGLG
MGNMKGGLAAMCLATAVLARHRKELPGRLTMTAVCDEVMFGDRGAVHLLAARPDVHGDYM
ISGEGPGFMNMAPAEKGLLWLDVETTGDGGHSSRAMNGETAVGKLVALLTKADALNDVYA
EIPAEINGVTGGPENTGLRLSFSAGVVRADGVRSLIATSARAEIDVRLPPGITGKEIEQR
VRALGSTDGISVRAVKGWDASWTSLSNPVVTEMMAAATTVRGARPDMVVRLPGSDARRWR
DLGVPSVCYGPQPTLSAGVDDYAEEQAVLDCARVYARAALRLMKHG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgacggaggagcaaacctttctcgacaagatcgacgcggaaatttccgcggag
cgtgacaacctgatcgcgttctgcggccggctggtgcgcgagccgagcgaaagcccaccc
ggcgagacgctcggtgtctccaaggtggtgcaggcgtatcttggcgaacacggcgtcgcg
tccgaggtggtcgcgtgcgatccgaatgcgccgaatctcgtggcgcatctcggcgagggg
gcaggacgacatatcgtctacaacgcgcatatggatacgatgcgccccggcgatgaaagc
tgctggagcgtgccgatccttgagctgacgcggaaggatggccgcctttacgggctcggc
atgggcaatatgaaaggcggcctggccgcgatgtgcctcgccaccgccgttctcgcgcgg
catcgcaaggaactgcccggccgtctgacgatgacggccgtctgcgacgaggtgatgttc
ggcgaccgtggtgcggtgcatcttcttgctgcgcgccccgatgtgcatggcgattacatg
atcagcggcgaagggccggggttcatgaacatggcgcccgccgagaaggggctgctgtgg
ctcgatgtcgagaccacgggtgatggcggtcattcctcgcgcgcgatgaatggcgagacg
gcggtcggcaagctcgtggcgctgctcaccaaggccgatgcgctgaacgatgtctatgcc
gaaattcccgccgagattaatggcgtgacgggtgggccggagaatactggcctgcggttg
tcgttcagcgcgggcgtcgtgcgtgccgatggcgtgcgcagccttatcgccacctcggcg
cgggccgagatcgatgtgcgtttgccgcccggcatcactgggaaggagatcgagcagcgc
gtgcgcgcactcggctccacggatggcatcagcgtgcgcgcggtgaaaggctgggacgca
agctggacctcgttgtccaatccggtcgtcacggagatgatggcggctgccaccacggtg
cggggcgcgcggcccgatatggtcgtgcgtctgccgggcagcgatgcacggcgctggcgc
gacctcggcgtgccgtccgtctgttacggtccgcagccgacgctctcggctggtgtcgac
gattacgccgaggagcaagcggtgcttgactgcgcccgcgtctacgcgcgcgccgcgttg
cggctgatgaagcacggatag
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