Oceanimonas sp. GK1: GU3_02200
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Entry
GU3_02200 CDS
T01667
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oce03016
]
GU3_02200
03036 Chromosome and associated proteins [BR:
oce03036
]
GU3_02200
Transfer RNA biogenesis [BR:
oce03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
GU3_02200
Prokaryotic type
GU3_02200
Chromosome and associated proteins [BR:
oce03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
GU3_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
AlaDh_PNT_C
FAD_binding_2
Pyr_redox_2
HI0933_like
Thi4
Pyr_redox
nSTAND_NTPase5
NAD_binding_8
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEY00197
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Position
458730..460619
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AA seq
629 aa
AA seq
DB search
MQYEEWFDVIVVGGGHAGTEAAAAAARMGANTLLLTHNIDTLGQMSCNPAIGGIGKGHLV
KEIDALGGIMAQAADNAGIQFRTLNASKGPAVRATRAQADRQLYRQAVRTRLENQPNLKI
FQQACDDLILDGDTVTGVITQTGLKFYGKTVVLTVGTFLNGRIHIGMDNYQGGRAGDPPS
IALASRLRELPLRIDRLKTGTPPRIDANSVDFSVMQPQPGDHPTPVFSFIGSRADQPRQV
PCYITHTNERTHEVIRQNLDRSPMYAGVIEGIGPRYCPSIEDKIMRFADKASHQIFVEPE
GLTSTELYPNGISTSLPFDVQIQIVRSIRGFEQAHIMRPGYAIEYDYFDPRDLRSNMENK
CLHNLFFAGQINGTTGYEEAGAQGLLAGTNAALRAFDRDAWSPRRDQAYLGVMMDDLSTL
GTQEPYRMFTSRAEYRLLLREDNADLRLTEEGRKLGLVDDHRWALFCDKVERIEQESQRL
RSTWINPRHAAAPALNEKLKTPLSREHNLEELLRRPELDYATLMAIEGIGPSIDHEQAAE
QVEIQTKYAGYIERQQDEIQKQLRNEHTQLPLDLNYAEVSGLSNEVIAKLNQARPETLGQ
ASRISGVTPAAISILLVHLKKRGLLRKSA
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgaagaatggtttgatgtcatcgtggtcggtggtggccacgccggaacggaa
gccgctgccgccgctgcccgtatgggggcgaacaccctgttgctgacgcacaatatcgat
accctcggacaaatgtcctgtaacccggccattggcggcatcggcaagggacatctggtc
aaggagatcgatgccctgggcgggatcatggcccaggccgccgacaacgccggtattcag
tttcgtaccctgaacgcgtcaaaaggcccggcggtacgtgccacccgggctcaggcggat
cgtcagctctatcgccaggcggtcagaacccggctggaaaaccagcccaacctgaagatc
tttcagcaggcctgcgacgatctgatcctcgacggcgacaccgtcaccggagtgatcacc
cagaccggcctgaagttttacggtaaaaccgtggtgctcaccgtagggacctttctcaat
ggccgtattcatatcggcatggacaactaccagggcggccgtgccggggatccaccctcc
atcgccctggccagtcgcctgcgcgaactgccgctgcgtatcgaccggctgaaaaccggc
acccccccccgtattgacgccaacagcgtggatttttcggtgatgcagccccagcccggc
gaccacccgaccccggtgttttccttcatcggtagccgggcggatcagccccgccaggtg
ccctgctacatcacccacaccaacgagcgcacccatgaagtgatccgccagaacctggat
cgcagccccatgtacgccggggtgatcgaggggatcggcccccgctactgcccgtcgatc
gaagacaagatcatgcgcttcgccgacaaggcctcacaccagatcttcgtggagccggaa
gggctgaccagcaccgagctttatcccaacggcatttccaccagcctgccgttcgacgta
cagatccagatcgtgcgttcgatccgcggctttgagcaggctcatatcatgcgccccggt
tacgccatcgagtacgactacttcgatcctcgggatctgcgatccaacatggaaaacaag
tgtctgcacaacctgttcttcgccggccagatcaacggcaccaccggctacgaggaagcc
ggcgcccaggggctgctggcgggcaccaatgccgctctgcgcgcctttgaccgcgacgcc
tggtcgccccgccgggatcaggcctacctgggcgtgatgatggatgatctgtccaccctg
ggcacccaggagccctaccgcatgtttaccagccgggccgaataccgcctgctgctgcgg
gaagacaacgccgatctgcgcctgaccgaggaaggccgcaaactgggactggtggacgat
caccgttgggcgctgttctgcgacaaggtggaacgcatcgagcaggaaagccagcgcctg
cgcagtacctggatcaaccccaggcatgccgccgccccggccctgaacgaaaaactgaaa
acgcccctcagccgggagcacaacctggaagagctgctgcgccgccccgagctcgactac
gccaccctgatggccatcgagggcattggcccgagcatcgatcatgaacaggccgccgag
caggtggagatccagaccaagtacgccggctacattgaacgccagcaggacgaaatccag
aagcagctgcgcaatgagcacacccaactgccgctggatctgaactatgccgaggtctcc
gggctgtccaacgaagtgatcgccaagctcaatcaggcacggcccgaaacgcttgggcag
gcgtcacgcatttccggtgtgaccccggcggccatctccattttgctggttcatcttaaa
aagcgcggcctgctgcgcaagtcggcctga
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