Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364979
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Entry
139364979 CDS
T10872
Name
(RefSeq) syntaxin-6-like isoform X1
KO
K08498
syntaxin 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139364979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139364979
Membrane trafficking [BR:
ocla04131
]
SNARE
SNAP-25[C] (Qc)
STX6
139364979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
FliD_C
Activator-TraM
Enkurin
Motif
Other DBs
NCBI-GeneID:
139364979
NCBI-ProteinID:
XP_070958407
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All DBs
Position
1:14166620..14173989
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AA seq
319 aa
AA seq
DB search
MSMEDPFFVVKCEVQKAVNTSQGLYQRWSELLQDPSGTSKEEVDWTTNELRNSLRSIEWD
LEDLDETISIVESNPKKFNLDTVELTKRKGFITSTRQIVKEMKDHMSSPTALAMSDKKNR
QALLGNSGSQGPIWQPGPDKYTRLDQELRTANSMFIDEQQTQQQLMAEQQDDQLELVSGT
IGVLKNMSERIGMELDEQTVMLDDFSNEMEGTHSRLDNVMKKLAKVSNMTTGNVCARPPG
VIKGHGWRGRKSTPPHPIKWLHHLIRKHPQEAFNRKNSGDRESNEIWPFFCQDILPVLSP
QPLDNVPAGTFPPAPRQCS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtctatggaagatccgtttttcgtcgtcaaatgtgaggtccagaaggcggtgaacact
tcccaagggctgtaccagagatggagcgagctgctacaggatcccagtggtacttccaag
gaggaggtggactggaccaccaatgagttgagaaacagtctgcggtccatcgaatgggac
ctggaggatctcgatgagaccatcagtattgttgaatcaaaccctaagaagttcaatctg
gacacagtggagctgaccaaacggaaaggcttcatcacaagcactagacaaattgttaag
gaaatgaaagaccacatgtccagtccaacagccttagccatgtcagacaagaaaaataga
caggctctgttagggaacagtgggtctcaaggcccaatctggcaaccaggacctgacaaa
tacacccgtctggaccaagagctacgtacggccaactccatgttcattgatgagcagcaa
acccagcagcagctcatggcagagcagcaggatgaccagctggagctggtgtctgggacc
atcggggtgctgaagaacatgtctgagaggattggtatggagctggatgaacagaccgtg
atgctggatgacttctccaatgagatggaaggtacccactccagactagacaatgttatg
aagaagctggccaaggtctccaacatgaccaccgggaatgtctgtgccagaccacctgga
gtcataaagggtcacggctggagaggaaggaaaagtacccccccacaccccatcaaatgg
ttgcaccaccttataaggaaacaccctcaggaagctttcaacaggaagaactcaggagac
agggagtcaaatgaaatctggccgtttttttgtcaggatatcctgccggttctttccccc
cagcccctagacaatgtgcctgccggtactttccccccggcccctagacaatgttcttag
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