Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139364988
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Entry
139364988 CDS
T10872
Name
(RefSeq) excitatory amino acid transporter 2-like
KO
K05613
solute carrier family 1 (glial high affinity glutamate transporter), member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139364988
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139364988
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
139364988
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GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
139364988
NCBI-ProteinID:
XP_070958384
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Position
13:complement(50243152..50276648)
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AA seq
751 aa
AA seq
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MTQGLGFCLFFLSLYRSILSSLHCVSPDALLWLDGRRHTADRMTNQQPVHQSNKAHYDEA
LPPIVGAGVLDLLEPKLPNSFLGTYCGFLIRNSLLVLTILGVIAGSLFGMLLRYVSITDP
NTLMLVSFPGDILMRMLKMLILPLIISSLITGLAGLDARSSGRMGSRAMVYYMSTTVIAA
ILGVILVLGIHPGNPKLRSSQEQDTAPKNQEVSSLDAFLDLIRNLFPENLVQACFQQVQT
VAKKVSVMPPNQTEPVIVSKKKLEFKWGMNVLGLIGFFITFGMCMGKMGEKGKLMSEFFN
ILNEIIMKMVGMIMWYSPVGIASLISGKIAAIGDLEVVARQLGMYMVTVIVGLMIHGGII
LPLIFFSITRKSPFTFYSGIFQAWITALGTASSAGTLPVTFRCLEENLKIDKRVTRFVLP
IGATINMDGTALYEAVAAIFIAQMNDINLDAGQIVTVSMTATLASVGAASIPSAGLVTML
LILTAVGLPTQDISLLIAVDWLLDRLRTSINVVGDSFGAGIVDHLSRAELAEIDAELLSP
EDEEFIPPPPVLTEIDLVDPKRPPELPPRSPRPPKLNHHGHSNLSQIYSITNSPRSVRSP
SPHSVRSPSPRSNCSHSHSPRPSAFRTHSPRILRRTEPGYCALPSHDNQIPTLPRSHRER
DRGDRDRRERDRERDRERDRERDRERDRERDRERDRGRERERLRGRDSDRYQSETEEEEE
RDRVLDEGSEGEESDDTAYDRRNTILPCDLP
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggactgggattttgcctattctttctctctctctaccgctccatcctttcc
tcccttcattgtgtctctcccgatgccttgctctggttggatgggagacgacacacagca
gacaggatgacgaatcagcagccagtccaccagtctaacaaggcccattatgatgaggca
ctgccacccattgttggagctggagtgttggacttgttggaacccaaacttcccaatagt
ttcttgggaacctactgtggcttcctcatccgaaactcactgctcgtccttactatactg
ggtgtcatagcggggtcgctgtttgggatgctgctgcggtatgtttccattacagacccc
aacaccctgatgctggtgtcctttcctggagacatcctcatgaggatgctgaagatgctc
atcttgcccctcatcatctccagcctcatcacaggtctggctggtctggatgctcgttcc
agtgggaggatgggctccagggccatggtctactacatgtccactacggtcatagctgcc
atcctgggggtcatcctggtcctggggatccacccgggaaaccccaaactcaggagcagt
caggagcaggacacggcccccaagaaccaggaggtcagcagtctggacgccttcctggac
ctcatcaggaacctgttccctgaaaacctggtgcaggcctgcttccaacaggttcaaaca
gtagcaaagaaagtgtcagtgatgcccccgaaccagacagaacctgtcatagtcagcaag
aagaaactggagttcaaatggggcatgaatgttctgggtttaattgggttcttcatcaca
tttggaatgtgcatggggaagatgggtgagaaggggaagctcatgtcagagttcttcaac
atcctcaatgagatcatcatgaagatggtgggcatgatcatgtggtactctccagttggt
atcgcctctctgatctcagggaagatagcagccatcggggacctggaggtggtggctaga
cagctgggcatgtacatggtgactgtcatagtgggcctaatgatccacgggggcattatc
ctgccactcatctttttctccatcacaaggaagagccccttcaccttctactccgggatc
ttccaggcctggatcactgccctgggcaccgccagcagtgcgggaacgttacctgtcaca
tttcgctgtctggaggagaatctgaagatcgataagcgcgtgacgcgtttcgtactgccc
atcggagccaccatcaacatggacggtacagccctgtacgaggcggtggcagccatcttc
atcgctcagatgaatgacatcaacctggacgcaggacagatcgttaccgtcagtatgaca
gccaccctggccagtgtgggagcggccagtattcccagcgcaggcctggtcaccatgctg
ttgatccttacagctgtgggcctgcccacccaggacatcagcctgctcatcgctgtcgac
tggctgcttgacagactgcgtacctcaatcaacgtggtgggcgactcgtttggtgctggg
attgtggaccacctgtccagggcagagctagctgagattgacgccgagctcctctcccct
gaggatgaggagttcatccccccgccccctgtcctcaccgagatagacctggtggacccc
aagagaccccccgagttacccccacgctccccccgcccgcccaaactcaaccaccacggc
cactccaacctgtcacagatctactccatcaccaactctccccgctccgtccgctctccg
tccccccattctgtccgctctccctccccgcgctccaactgttcccactcccactcccca
cggccctctgccttccgtacccattccccacgcatcctccgcagaacagagcctggctac
tgcgccctgccaagccacgacaatcagatccccacactccctcgctcccacagagagaga
gacagaggggatagagacagaagggaaagagacagggaaagagacagggaaagagacagg
gagagagacagagagagagacagagagagagacagagagagagatagaggaagagagaga
gagagactgcgggggcgagacagcgaccgatatcagagcgagacagaggaagaggaggag
agggatagggtgctggatgaagggagtgaaggagaagagagtgacgacactgcttacgac
cgcaggaacaccatcctgccctgcgacctgccctga
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