KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139366922
Entry
139366922         CDS       T10872                                 
Name
(RefSeq) contactin-associated protein-like 2
  KO
K07380  contactin associated protein-like 2
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    139366922
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:ocla04990]
    139366922
Domain-containing proteins not elsewhere classified [BR:ocla04990]
 Laminin domain-containing proteins
  Laminin G domain-containing proteins
   139366922
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 F5_F8_type_C Laminin_G_3 EGF F5_F8_type_C_2 COLFI hEGF Syndecan
Other DBs
NCBI-GeneID: 139366922
NCBI-ProteinID: XP_070960778
LinkDB
Position
15:14148387..14450432
AA seq 1339 aa
MHRRSPGLVLTLPLTSMLWIFNSFSSLHGALPSAQKCEVALSSPLPHTAFTASSVFTSGY
APGYAKLNQRGGAGGWSPQDSDSYPWLQVDLGSRKQVVAVATQGRYSSSDWTTRYRLLYS
DTGRNWKPYHQDGNIWAFSGNSNTESVVRHDLAQGIVGRLLRFVPLDWSGEGRIGLRIEV
YGCSYWADVINFDGQGVISYRFKVKKMKIIKDVIALKFKTWDSEGVILHGEGQQGDYITL
ELRKAKLLLQINLGSNQYGSILGHTSVTSGSLLDDHHWHSVMIERYRRNVNFTLDTHTQH
FRTNGEFDHLDLDYELSFGGMPYSGKPMGGGMKNFRGCMESINYNGDNITDLARRKKLDT
SSFRNLSFSCMESHSFPVFFNATSFLQLPGRANQDVVSLRFQFRTWNANGLLLFSNLDDG
TLEIALDDGKMGVHFNVTQAKNTRIAISSGSGLNDGQWHAVHLVAKVNSVMLTIDGDEAS
AVRTTTPITIRTGGTYHLGGYFLPTLAPPTQKSFQGCMQAILLDDQLADMHAVEKGIVGV
FENVSLDMCAIIDRCMPNHCEHGGRCKQTWDNFSCTCDRTGYTGATCHTSLFEQSCEAYK
HLGRSSDTYWIDPDGSGPLRPFKVNCNMTEDKVWTTVVNNLPAQTSVTGSSRERRTVLQL
NYSASMEQVTAITTSAEHCQQQVSYACRMSRLLNTPEGTPYTWWVGRSNEKHFYWGGSGP
GIQKCSCGIDRNCTDPKYDCNCDADHKQWREDSGLLVYKDHLPVSQVAVGDTNRQGSEAK
LTIGPLRCQGDHNYWNAASFTTPSSYLHFSTFQGETSADISFYFKTSAPYGVFLENLGNT
DFIRLELKSPTVVSFSFDVGNGPVELAVHSATPLNDDQWHRVMAERNVKEAVLQLDLNYR
ETRPAPPQGHTRLELFSQLYVGKPASLTCKDSAAGGQRGFLGCIRSLRMNGVTLDLEERA
KVTPGVKPGCQGHCTSYGMYCRNGGKCVEKYNGYSCDCTATAYDGPFCTKDVGGFFEAGT
LVRYNFLSEAAAANQDARFLAQPLTAQEVNLTGEAVAFSFSTSNTPAILLYVSSKTQDYL
ALVLRQNGTLQVRYNLGGLKEPFTIDVDQRNLANGQPHTINMSRINRTITIQLDHYPPVS
YSLPEASDTQLNLVKTLFLGKVFETGVIDPVLIERYNTPGFVGCLSRVQFNGVAPLKTAL
RNPITDRPTDRQSVPVSYQGKLVESNCGASPLTIPPMSAVTDPWRLDSGAEFPFNEERVI
PDGVNRNSAIIGGIIAVVIFTVLCTLVFLIRYMFRHKGSYHTNESKGAEPASGESADTTI
ICAETNPETIEESKKEWFI
NT seq 4020 nt   +upstreamnt  +downstreamnt
atgcaccggcgaagtcccgggctggttttaacactcccgttaacgtcaatgctgtggata
tttaacagtttcagcagcttgcacggtgctctcccttcagcacagaagtgtgaggtggct
ctctcctctcctctccctcacacagccttcactgcctcctcagtcttcaccagtggatac
gctccaggctacgccaagctcaaccagagaggaggtgcagggggctggtctccccaggac
agcgacagctacccgtggctccaggtggacctgggcagccggaaacaggtagttgccgtg
gcaacgcagggcaggtacagcagctctgattggacaacgaggtacaggctgctctacagc
gacacgggcaggaactggaagccctatcatcaggatggaaacatatgggcgttctcaggc
aactccaacacggagagcgtggtaagacacgacctggcgcaaggcattgtgggccggttg
ctgcgttttgtaccgctggactggagtggagagggacgcatcggcctccgcatagaggtc
tacggctgttcctactgggcagacgtaataaactttgatggacagggagttatatcgtac
cgatttaaggtgaagaagatgaagatcataaaggatgtgatcgctctgaagtttaaaacg
tgggatagtgaaggagtcattctacacggagagggacagcaaggagactatattacatta
gagctacgcaaggccaaactcctcctgcagattaacctaggcagtaaccagtacggttcg
atcctgggccacacctctgtgacgtctggaagcctattggatgatcaccactggcactct
gtgatgattgaacgataccgacgcaacgttaacttcaccctggacacacacacacaacac
ttcaggaccaacggagagtttgaccatctggatctagactacgagttgagttttggtggc
atgccctacagtggtaagccaatgggaggggggatgaagaacttcagaggctgtatggag
agcatcaactacaacggagacaacatcactgatctggcacgacgcaagaagctagacacc
tccagctttcgtaatctgtcattctcttgcatggagtctcactccttcccagttttcttc
aacgccaccagcttcctgcagctcccaggaagagccaatcaggatgtagtatcacttaga
ttccagttccgcacctggaacgccaacggactcctcctcttcagtaaccttgacgacgga
acgcttgagatcgcccttgacgacgggaagatgggagttcacttcaacgtgacgcaggcg
aagaacaccaggatagcaatttcatcaggttcaggcctaaacgacggccagtggcacgcg
gtgcatctagtcgctaaggtgaactctgtcatgttgacgatcgatggagacgaagcgtca
gcggtccgaaccaccacgcctatcaccatcaggactggtggaacataccatctgggaggg
tacttcctgcctaccttagcccctcccacccagaagtcgttccagggctgcatgcaggca
attctgttggatgatcagctggcggatatgcatgccgtggagaaaggcattgtgggagtg
tttgagaacgtcagcttggacatgtgtgccatcatagacaggtgtatgcctaaccattgt
gagcatggaggcaggtgtaaacagacgtgggataattttagctgcacctgcgacagaacc
ggatacactggagccacttgccacacatcgttgtttgaacagagttgtgaggcgtataaa
cacctgggcagatcttcagacacatactggatagatccggatgggagtggacccctcaga
cccttcaaagtcaactgcaacatgacagaagacaaggtgtggactacagtggtcaataat
ctaccagcccagacctcagtgaccgggtctagcagagagagacgcactgtgctgcaactc
aactacagtgcctctatggaacaggtcacagctattactaccagtgctgaacactgtcaa
caacaagtgtcgtacgcctgccgcatgtcccgactgctcaacacacccgagggaaccccc
tacacatggtgggtgggtaggagcaatgagaaacatttctactggggaggatcagggccg
gggatacagaagtgttcctgtggtatcgacaggaactgtactgaccccaaatacgactgt
aactgtgacgctgaccacaaacaatggagagaggacagtggcctgttagtgtataaggac
catctgccagtcagtcaggttgccgtgggtgacaccaaccggcagggttcagaggccaag
ctcaccatcgggccactccgttgtcaaggagaccataactactggaacgcggcgtcgttc
accacgccctcctcctacctgcatttctccaccttccagggagagaccagcgcagacatc
tccttctacttcaagaccagcgctccctacggggtgttcctggaaaatctcggcaacact
gacttcatacgcctcgaactcaaatctcctactgttgtctcgttctcctttgatgtgggg
aatggtcccgtggagttggccgtccattcagccacgcccctcaacgatgaccaatggcat
cgtgtgatggcggagcggaacgtgaaggaggcggtgctacagctggatctgaactatagg
gaaactcgtcccgcccctccacagggacacacaagactagagctgtttagtcagctttat
gtggggaagcctgcttcattgacctgcaaagacagtgcagcaggaggtcagagggggttt
ctgggatgcattcgctccctcaggatgaatggtgtgacccttgaccttgaagagagggcc
aaggtaactccaggtgtaaagccaggctgtcagggtcattgtaccagttatgggatgtac
tgcaggaacggaggaaagtgtgtggagaaatataatggctactcctgtgactgcactgcc
acggcatacgacggacccttctgcaccaaagatgtggggggcttctttgaggcgggcact
ctggtgagatacaacttcctgtcagaggcagcggcagccaatcaggacgcaaggttcctt
gcccaacctttgactgcacaggaagtgaatctgacaggagaagcagtagcgtttagcttc
agtacgtccaacacaccagctatactgctgtacgtcagctccaagacacaagactacctg
gcgctggtgctacggcagaatggaactctccaggtgcggtataacctgggcggtctcaag
gagccgttcaccatagacgtggaccagcgtaacctagccaacggacagccacacactatc
aacatgtccagaatcaacaggactatcaccatacagttggaccactacccccctgtcagc
tactctctcccagaggcatcagacacacagctcaacctggtcaagacattgttcctgggg
aaggtatttgagaccggagtgatagacccagtgcttatagagcgttataacactccaggg
ttcgtaggctgtctgtcacgcgtccagttcaacggagtcgcacccctgaagactgcccta
agaaaccctataacagacagaccaacagacagacagtctgtgccagtgtcctaccagggt
aaactggtagaatctaactgtggagcatcacctctcaccatcccaccaatgtctgctgtc
accgatccttggcgcctggactcaggtgcagagttcccattcaacgaggagcgagtgatc
ccagatggagtcaacaggaactcagccattataggaggtatcattgccgtggttatcttc
accgtcctgtgtacactggtgttcctgattcgctacatgttccgtcacaagggatcatac
cacaccaatgaatcgaaaggggcggagccagccagtggcgaatcagcagacaccaccatc
atctgcgccgaaaccaacccggaaaccatagaggaatcaaagaaagagtggttcatctaa

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