Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367196
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Entry
139367196 CDS
T10872
Name
(RefSeq) tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocla03016
]
139367196
Transfer RNA biogenesis [BR:
ocla03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
139367196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
FtsJ
PUA
Methyltransf_25
Cons_hypoth95
PCMT
ASPP2-like_RA
RASSF8-10_RA
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
139367196
NCBI-ProteinID:
XP_070961460
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Position
15:complement(30330329..30339373)
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AA seq
479 aa
AA seq
DB search
MPEEMSIFPRIALKPEVHDYLRNVFINKEVLAAVSQGEAEQRFQRLLSCLSHPPALTCVR
ASTHLASLEEIQHRLGEELKQQQKCDSQSEDISVIILPHPHIPDVLLLPVIGPRPVVQLT
SEVIVGAQCGSAVLRGAHVFAPGILATPKFMKTGDAVSVFSDLEGKCTRGNKDFKGKKVF
VGNGVAEMDRSNIFCSDEPVKGVGIRMVEPLYQSPSFDGVLPSLAFLQNLPSVVVGHVLG
PRPGERILDMCAAPGGKTCHIAALMRGQGEVVALDKIRGKVERIRQNAKALHLDCIKAHC
FNSIKAVCTDQAQDTEGPPFPPQSFDRVLLDAPCSGLGQRPSMVCTWNLKEICSYQPLQR
KLFHTAVRLLKRGGVLVYSTCTVTLAENEEQVAWALNTFPCLTLQPQEPHIGAEGMLGAG
LSPEQLRLLQRFSPELGWSAAEARGEDDSPTEQPESPTPLAHRANKDTIGFFIAKFLKS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagaaatgtcaattttcccaagaattgcattgaagccagaagttcatgattac
ttgaggaatgtcttcataaacaaggaggtgctggctgcagtgagtcaaggagaggcagaa
cagaggttccagaggctgctgtcctgcctgtcccacccgcctgccttgacctgtgtacga
gccagcactcacctggcttccctggaggagatccaacacaggcttggggaggaactcaaa
cagcagcagaagtgtgactctcagtctgaagacatttccgttattattctcccccaccca
cacattccagatgtgctgcttcttcctgtcatcgggcctaggcctgtggtccagctcacc
tcggaggtcatagtaggcgctcagtgtggcagtgctgttctgaggggagcgcacgtcttc
gccccagggatcctcgccacacccaagttcatgaagacaggagatgctgtgtctgtgttc
tcggacctggaggggaagtgcacacgggggaacaaggactttaagggaaagaaagtgttt
gtgggaaatggagtcgctgaaatggaccgctccaacatcttctgctcagacgaaccagtc
aagggcgttggtattcggatggtagagcccctgtaccagagcccctccttcgatggggta
ctacccagcctggcgttcctacagaacctcccatcggtggtggtgggtcacgtgctgggg
ccccgtcctggagagcgcatcctggatatgtgtgccgctcccggggggaagacctgccat
atcgctgccctgatgcggggacagggagaggtagtggccctggataagatcagaggcaag
gtggagcgcatccgtcagaacgccaaagcgctgcatctggactgcatcaaagcccactgc
ttcaatagcatcaaggctgtgtgcactgaccaggcccaggacactgagggtccacccttc
cctccacagagttttgaccgggtgttgctggatgctccatgtagcggtctaggccagaga
cccagcatggtctgtacctggaacctgaaggagatctgctcctaccagcctctacagcgc
aagctcttccacaccgcggtacggctcctgaagagaggtggagtcctggtgtacagcacc
tgcactgtgactctggcagagaacgaggagcaggtggcctgggcccttaacaccttcccc
tgcctcacactacagcctcaggagccccacatcggagcagagggcatgctgggagctggc
ctgtcacctgagcagctgcgtctcctccagaggttcagtcctgagttgggctggagcgcg
gccgaggccaggggagaggatgacagccccacagaacagccagagtccccaacccccctg
gcacaccgagccaacaaggacactatcggcttcttcattgccaagttcctgaagagctga
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