Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139367721
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Entry
139367721 CDS
T10872
Name
(RefSeq) meiotic recombination protein SPO11
KO
K10878
meiotic recombination protein SPO11
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139367721
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
139367721
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
139367721
NCBI-ProteinID:
XP_070962132
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Position
16:56681282..56692343
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AA seq
390 aa
AA seq
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MESNMSEQFFEIDNFGLELLENVDMMMEPQHSHGEVSSQEVLILIEKVILEIVTSLSKDE
APVLVLPNRSSWANVSFDNAVGLQMTSGSSVTTVRSNCSSSVTKFGHILKVLSTIYKLVQ
SNVYATKRDIYYNDTQLFGSQRTVDSIVDDISCMLKVPRRRLHVLATSKGFISGDLCYLE
EDSTKVDCHSNSTATPVSSNVGGIRNIVSSAKFVLIVEKDATFQKLLDYDFCTKLCPCIM
ITGKGVPDVNSRLMVRKLWDTLHIPIFALVDADPYGIEIMCIYKYGSVAMSFEAHSLTVP
SIMWLGLLPSDLQRLRVPEDALIPLTQRDQNKLTSLLKRPYLACQPAWQREMEMMQRSKV
KAEIQSLASIAPDFLSRVYLPNKLRYGGWI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaacatgtctgaacaattctttgaaattgacaatttcggcctggagttgttg
gaaaatgttgatatgatgatggaacctcaacacagccatggggaagtcagcagccaggaa
gttttaatcctcattgaaaaggtgattctagagatagtcaccagtctgtccaaagatgaa
gctccagttttggtcctacccaaccgatccagctgggccaatgtaagttttgacaacgcc
gttggccttcaaatgacttcaggaagttctgtcaccacagttcggagcaactgttcctcg
tctgtcactaaatttgggcacattctcaaggttctatccaccatctacaaacttgtgcag
agcaacgtatatgccacaaaaagggacatctattacaacgacacacagctttttggttca
cagaggactgtcgattccattgtggatgacatctcctgcatgctcaaggttccacgcaga
agactacatgtgctagctacgtccaagggcttcatctcaggtgatctgtgttacctggag
gaggacagcaccaaggtggactgccactccaactccactgctactccagtctcttctaat
gttggcggaatcaggaacattgtgtcatctgctaagtttgttttgatagtggagaaggac
gctaccttccagaaactgctcgattatgacttttgcaccaagttatgtccttgcatcatg
atcacaggtaaaggtgtcccagatgtgaacagcaggctgatggtgagaaagctttgggat
accctgcacatccctatatttgctctggtggatgctgacccttacggcattgagatcatg
tgcatctacaagtacggatcagtggccatgtcatttgaggcccacagtttgaccgtcccc
agcattatgtggctaggcctcctcccctctgacctccagagattgagagtacctgaggat
gctctgatccccctcacacagagagaccagaataaactgaccagcctgctgaagagaccc
tacttggcctgccaacctgcctggcagagagagatggaaatgatgcaacggagcaaggtg
aaagctgagatccagtccctggcctccatagcccctgatttcctcagccgcgtctacctg
ccaaacaagctgcgctacgggggctggatatga
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