Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139369880
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Entry
139369880 CDS
T10872
Name
(RefSeq) transcription factor E3b
KO
K09105
transcription factor E3
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139369880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139369880
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
139369880
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GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
139369880
NCBI-ProteinID:
XP_070965263
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All DBs
Position
17:64544262..64552784
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AA seq
420 aa
AA seq
DB search
MSSRLLLRQQLMREQAQEQARQEAQEQASVAQLRATDSTPAVAVTLPPIAARPLSAQVPV
EVLKVQTHLENPTKFHIQQSQRQQVKQHLSATLCNKLAIQTLGESPLALSSSAPEMDPIA
RSVPNSSMASHNLGSNKEELPWNLLEVNHSPGMAAPTHTVSNSCPADLTNIKREYSDADN
KARVKERQKKDNHNLIERKRRFNINDRITELGSIIPNSRDSELRWNKGTILKASVDYIRK
LQKEQQRAKEVEMRQKKLEHANHCLMLRIQELEVQAQLHGLSSPMPYGLSSDPSFLQQQH
LQQGGHILGPRTGVACSQTFLSLGDAAMAQPIPTSFLSPPSSDSPVGVTIGSPLDLGSLR
FAELDDPSNAGLFPGVGLGDIVMDEGCTRSPERVDPLFFVSPGASKTSSRRSSFSMEEDL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcacgcttgttgcttcggcagcagctgatgcgggaacaagcccaggagcaagcg
agacaggaggcccaggagcaggcctctgtggctcagctcagggcaactgactccacccct
gctgtcgctgtcactctgcccccaatagctgctcgccctctttccgcacaggtgcccgtg
gaggttttgaaggtgcagacccacctggagaaccccaccaagtttcacatccagcagtct
cagaggcagcaggtgaagcagcatctctctgccaccctctgcaataagttggcaattcag
accctgggtgagtctcccctggccctgtctagctctgcccctgagatggatcccatagcc
cgcagtgttcccaacagctccatggcttcacacaacctgggatccaacaaagaggagctc
ccctggaacctcctggaagttaaccatagtcctggaatggcagcacctacccacactgtc
agcaactcctgccctgcggatctaaccaatattaaaagggaatattctgatgcagataac
aaagctcgggtgaaagagagacagaagaaagacaaccataacctcattgagaggaagcgg
aggtttaacatcaatgaccgcataacagagctggggtccataatacccaattcaagggac
tcggagttgcgctggaataagggcaccattctgaaggcctcagtggactacatcaggaag
ctgcagaaggagcagcagagagccaaggaggtagagatgcgtcagaagaagctggaacat
gctaaccactgcttgatgctgcgcatccaggagttggaagtgcaggctcagcttcatgga
ctctccagcccgatgccctatggtctgagttcagacccctccttcctccagcagcagcac
cttcagcagggaggtcatatacttgggcccagaactggagtggcctgctcccaaaccttt
ctcagcctgggtgatgcagccatggcacaacccatccctacctccttcctctctccaccc
tcctctgactcccctgtgggtgtgaccataggcagccccctcgacctgggcagtctgcgc
tttgccgagctggatgacccctccaatgctgggctgttcccaggcgtggggttgggggac
attgtcatggatgaggggtgcacacggtcccctgagagggtggacccactgttttttgtg
tcaccaggtgcctcaaagaccagcagtcgtaggagcagcttcagcatggaggaggacttg
taa
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