Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370253
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Entry
139370253 CDS
T10872
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139370253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139370253
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Others
GGA
139370253
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
Ferritin
HEAT_Maestro
Hrs_helical
Luteo_P1-P2
PCRF
LMBR1
Motif
Other DBs
NCBI-GeneID:
139370253
NCBI-ProteinID:
XP_070965714
LinkDB
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Position
17:complement(11068987..11077073)
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AA seq
650 aa
AA seq
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MAAPPEEESLESRVNKATNPLNKEADWDSIQGFCEQLNNEPEGPQLATRLLAHKIQSPQE
WEAMQALMVLEMCMKNCGKRFHNEVGKFRFLNELIKVVSPKYLGTRAPEPVKKKVLEVMF
SWTVGLPDEPKIADAYQMLKKQGIVKQDPVLPDEPLPPPPPRTKSVIFEDEEKSKMLSRL
LNSTHPEDLRAANKLIKEMVQEDQKRMEKVSKRVNAIQEVKESVGLLTQLLGDYSKESSS
QSNQELIKDLYQSCEKMRPTLFRLASDTEDNDEALADILQANDSLTQVINLYRQLVKGEE
VNGDSTAMPILPGSSTALLDLTGLDTSPTGLPSYPDTPSLQTPSQELGISLLDDELMSLG
LNDVTPNSTHTPQSGDWNSFQCSDSVEPVVPAVPTATVLLPSVTPIPQAPSGGAPAASPK
ALDELDLLGKTLLHQSLPPGTQHVNWDKLQPQSRPTLRDLQTKSSTNTTSTSTPSPVLAF
PSEQPGSLLDSLPSPGPPTPAPQNDISLANVTVPLESIKPSSLLPVTVFDKHSLRVLFHF
ARDSPPSRPDVLVVIISMLSSAPIPVTNIRFQSAVPKVMKVKLQPPSGTELPAFNPILPP
AAITQVLLLANPHKEMVRLRYKLTFDLGEESHDESGDVEQFPPPDTWGNL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccagaggaggagagcttggagtctcgcgtcaacaaagccaccaaccct
ctgaacaaggaggcggactgggacagtatccagggcttctgtgaacagctcaacaatgag
cctgaaggtcctcaactggctaccagacttttggcccataagatccagtcaccccaagaa
tgggaggccatgcaagcactaatggtcctagagatgtgcatgaagaactgtgggaagagg
ttccacaatgaagtgggcaaattccgcttcctcaacgagctcatcaaggtggtctcacct
aagtacctgggtactcgggccccagagccagtgaagaagaaggttctggaggtgatgttc
agttggacggtgggtctgcctgacgagcccaagatagcagacgcctaccagatgctgaag
aaacaaggcattgtgaagcaggacccggtacttcctgatgagcccctcccaccccctccg
cccagaactaagagcgtcatctttgaggatgaggagaagtccaagatgctgtctcggctt
ttgaatagcactcaccctgaagatctaagagcagcaaacaaactcattaaggaaatggtg
caggaggaccagaagcgaatggagaaggtgtctaagcgtgtgaacgccatccaggaggtg
aaggagagtgtgggcctgctgacccagctactgggagactatagcaaggagagcagctcc
cagagcaatcaggaactcatcaaggacctataccagagctgtgaaaagatgaggcctact
ttgttccgattggctagcgacacagaggacaacgatgaggccttggctgacatcctgcag
gccaacgacagcctgactcaggtcatcaacctgtacagacagctggtgaagggagaagag
gtgaacggagacagcacagccatgcccatactaccaggaagtagcacagccctcctagac
ctgacagggttagacacctcgcccactggacttccctcctacccagacaccccctcacta
cagaccccgtcacaagaactgggtatcagcctgctagatgatgagctcatgtcactagga
ctcaatgacgtaacgcccaactctacccacacccctcagtcgggagactggaactccttt
cagtgttctgacagtgtagagccagtcgtcccagcggtgcctactgcaacagtgttgcta
ccgtccgtgacccctatcccccaggctccatcagggggggcccccgctgcttcccctaaa
gccctggatgagttagacctgctgggcaagaccctgctgcatcagtccctacccccgggg
acgcagcacgtcaattgggataaactgcagccccagtccagacccaccctgcgagacctc
cagaccaagtccagtaccaacactactagcacctccacccccagccctgtcctggccttc
ccctctgagcagcctgggtctctcctagactccctgcccagccccgggcctcctacccca
gccccccagaacgacatctccttagctaacgtgactgtgcccttggaatcaatcaagcca
agcagcttgttaccagtgactgtatttgacaagcacagtttgcgggtgctgttccacttt
gcccgtgactctcctccctctcggccggacgtgctggtagtgataatttccatgttgtcc
tccgcacccataccagtcaccaacatccgcttccagtctgcagtacccaaggtgatgaag
gtgaaactacagcctccttcaggaactgagcttccagccttcaaccccatcttaccccca
gccgccatcacacaggtcctactgctggccaatcctcacaaggagatggtccggttgcga
tacaagctcacatttgacctgggagaagaatcacatgacgaatccggcgatgtagaacag
ttcccccctccagatacctgggggaacctttag
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