Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139370344
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Entry
139370344 CDS
T10872
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3-like
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139370344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139370344
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Others
GGA
139370344
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
Cmr7b-like
Motif
Other DBs
NCBI-GeneID:
139370344
NCBI-ProteinID:
XP_070965871
LinkDB
All DBs
Position
17:16443851..16451499
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AA seq
719 aa
AA seq
DB search
MADAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW
EAIQALMVLEACMKNCGKRFHNEVGKFRFLNELIKVVSPKYLGDRVSEVVKKRVVDMLFS
WTLSLPNEAKISDAYQMLKKQGIVTVDPELPLDKALMPSPSSRPKNPVFENEEKSKRLAE
LLKSKKPEDLQEANRLIKNMVKEDEVRLQRASKRSSTLEEVNNSVKLLNEMLSHFSRDQS
TDGDKELIKELYGDCDKLRGTVFKLATETEDNDSSLGDILQASDDLSRVINSYKRIVEGQ
TANGEIEPLGLSTTTQCTKDSNQSEILIDLAGLDLQSPSPPEHPPLAQHPDFIPADLLYG
SAPLQDLQACPAMEDPSPRKPSAALSLLDKELLSLGLNDPVPAKDDLNNLWTFMQAPNPV
LDLFGSAPATVFSAASTDQLGASTTEPVSKTAAPQSSVAASFPYPSAAAQAVSASLNHSL
QDLAMLDLGSPKSMPGVINTGDLFGMGEAMGAIASPRIGIPASRSSPLPLGILPAAAAAP
TLSPPAADDSPLLRSLSPILILPLGQASPAKFPEISLSNVHVPLEAIKPSKLCPVTAYDK
DGVRVLLHFATDCPLGRPDVLVMVVSMLNTAPLPVRNMVLQAAVPKSMKVRLQPPSGTDL
APFNPIFPPAAITQVMLLANPLMEKVRMRYKLTFTLGEQQCTETGEVDQFPPAEIWGAL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcggaaggggagtcgctggagtcgtggctcaacaaagccaccaacccatcc
aacaggcaggaagactgggagtacattataggattctgtgaccaaatcaataaggaattg
gaaggcccacagattgctgtgagattgttagcccataaaatccagtccccacaagaatgg
gaggcgatacaggctttgatggttttagaggcttgcatgaagaactgcgggaaaaggttc
cacaatgaagttgggaaatttaggtttctaaatgaactcatcaaagtggtgtcacctaaa
tatctaggtgacagagtgtcggaggtggtgaagaagagagtggtagatatgctcttcagc
tggacactctctttacccaatgaggccaagatcagtgatgcttatcaaatgctgaagaaa
caaggtattgtcacagttgaccctgagcttcctctggataaggcactgatgccgtcgccc
tcctcccggcccaagaaccctgtgtttgagaatgaggagaagagcaagcgactggccgag
cttctgaagagcaaaaagcctgaggatctacaggaggccaaccgcctcatcaaaaacatg
gtcaaagaggatgaggtgaggctgcagagagcgtcgaagcgcagcagcaccctggaggag
gtcaacaacagtgttaaactgctcaacgagatgctcagccacttcagcagggaccaatca
acggacggagacaaggagcttatcaaagagctttacggtgactgtgacaagctgaggggg
actgtgttcaagctggccacagagacagaggacaatgacagcagcttaggtgacatattg
caggccagtgatgacctgtcccgcgtcatcaactcctataagaggattgtggagggacag
actgccaatggagagattgagccacttggactgtcaactactacacaatgtaccaaagac
agcaaccagtctgagatcctgatagacctggctggtctggacctccagagcccctcccca
ccagagcatcctcctctagcccagcaccccgactttatcccagccgacctgctgtacggg
tctgcccccctccaggatcttcaggcctgccctgccatggaggaccccagtcccagaaaa
ccctctgctgcactgtctctactggacaaggagctcctctctctaggacttaatgaccca
gttcctgcaaaagatgacttgaataatctgtggacatttatgcaggctcccaacccagtt
ttggacctgtttggcagtgccccagctactgtattctctgcagcttctacggaccagtta
ggagcttctacaacagagcctgtttctaagacagccgccccacaatcctcagtggcggcc
tccttcccctaccccagtgctgctgcccaggcagtctccgcctccctgaaccacagtcta
caggacctggccatgttggatttgggtagccccaagagcatgcctggtgtgatcaacact
ggcgacctgtttgggatgggtgaggctatgggtgccattgcctccccgagaattgggatc
cccgcctccagatccagccctctccctctgggtatcctaccggctgctgctgcagcccct
accttgtccccaccggctgctgatgacagcccccttctccgctctctgtcccccatcctg
attctcccgctggggcaggccagcccagccaagttccctgagatctccctaagtaacgtc
cacgtccccctagaagccatcaagccaagcaagctgtgtcctgtgacggcctatgataaa
gacggggtccgcgttctcctgcactttgccaccgactgtccgctgggccggccggatgtg
ctggtgatggtggtgtccatgctgaacacggcacctcttcccgtcaggaacatggtccta
caagctgctgtacccaagtcgatgaaggtgagactacaaccgccctcgggaactgacctg
gcgccttttaaccccatctttccccccgccgccatcactcaagtcatgctgctggccaac
ccactaatggagaaggtccggatgagatacaagctgacgttcacactgggagagcagcag
tgcacagagactggggaggtggaccagttccccccagccgagatatggggggctctatag
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