Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139371255
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Entry
139371255 CDS
T10872
Name
(RefSeq) activity-dependent neuroprotective protein a isoform X1
KO
K22591
activity-dependent neuroprotector homeobox protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139371255
03036 Chromosome and associated proteins [BR:
ocla03036
]
139371255
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
139371255
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139371255
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADNP_N
zf-C2H2_Adnp2
zf_C2H2_ZHX
zf-C2H2_4
Homeodomain
zf-C2H2_ZNF462
Zn_SUZ12
zf-Di19
Motif
Other DBs
NCBI-GeneID:
139371255
NCBI-ProteinID:
XP_070967613
LinkDB
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Position
17:64340753..64346003
Genome browser
AA seq
815 aa
AA seq
DB search
MIVGFNCNSPIGHSGKMYQLPVNNLTRIRRARKQVKAALCDIGLEYCKEQAEDLKEFCPD
ENYVKNTLCLELCSWDPTFSKTQEYRSKPFCCTECNFSSKYYSGYKNHFRNVHRHNFENR
ILLNCPYCTFTASKKTMETHVKVFHISSVARQGLGGYQGAAVGANNKVEKAMYYCKKCNF
RDPLYNVVRRHIYREHFQHVVSPYVAMVSETSVKNGANAVNGNNILCKRCQFSTRSYEAL
VQHVIEYHERIGSQVTTMIGHANVVVSRPQSYAMAQKGSVMTGGRTLTSEQVSHMVGVHL
KQGPTGLKNVTCQSSIAGQRLTIPGNGGLGEGANASLTSQTQKWKMCTVCNELFPENLYS
AHFEKAHRAKKVWAIAKYIMKIHNFTSKCLLCNRYLPSDTLLNHMLIHGLTCPQCHASFN
NVEKMLDHVGQAHPDDFVGPPAASPLTFDLTIGQAKNKIIQLIVITYNMKEPVAAQEQSM
ASHAQNSFHTQVKSMPSKMPVNKKDMLARSQATVSGSNEVGKTLCPLCFTILKGPISDAL
SQHLRERHQVLQTMHPVEKKMTYKCIHCLGVYTSNMVASTITLHLVQCRAVGRAQKGLGP
KSALTLNSSGAGFLKRQLPSQPMSGSKRMKIKNDVVYSPMNMDKPGEAVDLVLDPRNYEH
KTYEARKAFLTTYFNRCPYLTSQEEEKLSASLWLWKSDIASHFANRRRSCEGDCETRKLK
VLLGFDMQALKGLKHDMDFEEKTKLPITSVEKAFKSRPALNTDQRKQCETINCTLKLSTY
TEPISIDSSDSESEPEDCSIENGQVDTPKSVDVTS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcggattcaattgtaacagtccaattggccattctggaaagatgtatcagctc
cctgtgaacaacctcactaggatacgaagagcaagaaaacaggtgaaggcggcactttgt
gacattgggctggagtactgtaaggagcaagcggaggacctcaaggaattttgcccagat
gagaactatgtgaagaatactctctgtctggaactttgttcatgggatccgacattctca
aaaacacaggagtaccggtcaaagcctttctgctgcacagagtgcaacttctcttccaag
tactactcgggctacaaaaaccacttccgaaatgtccacaggcacaactttgagaaccgc
atcctgctcaactgcccttactgcaccttcactgcgagcaagaagacaatggaaacgcat
gtcaaggtcttccacatatctagtgtggcacgtcagggtctagggggctaccagggggct
gctgtgggggcaaataacaaggtggagaaggcaatgtactattgcaagaagtgtaacttc
cgggaccctctgtacaatgttgtgcgaaggcacatctacagggagcacttccagcatgtg
gtctcaccctatgttgccatggtctcagaaacatcagtcaaaaatggagccaatgctgtc
aacggcaacaacatcctctgtaagcgctgtcagttctccacccgtagttatgaggcgcta
gtgcagcatgtcattgaatatcatgagcgcattggctctcaggtgacaaccatgattgga
catgctaatgttgtggtgtccagaccgcaaagctatgcgatggcccagaagggttctgtg
atgactgggggtcgtaccctgacgtctgaacaggttagccatatggtaggggtccatcta
aagcagggacctactggactaaagaatgtgacatgtcagtcctctattgctggccagcgt
ttgaccattcctggcaatggtggtttgggagaaggtgctaatgctagtcttacatcccaa
acacagaagtggaaaatgtgcacggtctgcaatgagctcttccctgaaaacctgtacagt
gctcattttgagaaggcacacagggctaagaaggtatgggcaattgccaagtatatcatg
aagatccacaacttcaccagtaagtgtttgctttgcaaccgatatctgcccagtgacaca
ttgcttaaccacatgctgattcatgggctcacctgcccacagtgtcatgccagcttcaat
aatgtggagaaaatgctagatcatgtggggcaggctcatccagatgactttgttggtcct
ccagccgcctccccgcttactttcgacctcacgattgggcaggctaagaacaaaatcata
cagcttattgttataacctataacatgaaggaacctgtagctgctcaggagcagtctatg
gcttcccatgcccagaacagcttccacactcaagtgaagagtatgccttcaaagatgcca
gtgaataagaaagacatgcttgccagaagtcaagccactgtatctggcagcaatgaggtt
ggcaagaccttatgtccactatgttttaccatcctcaagggtcctatatctgatgccttg
tcacagcatctgagagaacgacaccaagtgcttcagacaatgcaccctgtggagaagaag
atgacatacaagtgcatccactgtttgggcgtctatactagcaacatggtggcctccacg
atcactctgcaccttgtgcagtgccgagctgtgggaagggcccagaagggcctgggacca
aagtctgccttgacactcaactcctctggtgcagggttcttaaagcgtcagctaccctcc
caacccatgtctggctccaagaggatgaagataaaaaatgatgttgtatattcccccatg
aatatggacaagccaggggaggctgtggatctagtgttggaccctaggaactatgagcac
aagacttatgaagcacgcaaagccttcctcacgacctatttcaatcgttgcccctattta
acttcacaggaagaagagaagctgtctgcaagcctgtggctctggaagtctgacattgcc
agtcacttcgctaatcgacggaggtcatgtgagggagactgtgagaccaggaaattgaaa
gtgttacttggctttgacatgcaggcactcaagggactgaagcatgacatggactttgag
gagaaaaccaagctccccatcacgtcagtggagaaggcctttaagtctaggccggcactt
aacacagaccaaagaaagcaatgcgagaccattaactgtaccctcaagctaagtacttac
acagaacccatatctattgactcgtctgatagtgagtcagaaccagaggactgttccatt
gagaatgggcaagttgacacaccaaaatctgtggatgtcacgtcttaa
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