Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373134
Help
Entry
139373134 CDS
T10872
Name
(RefSeq) transformer-2 protein homolog beta-like
KO
K12897
transformer-2 protein
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139373134
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ocla01009
]
139373134
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ocla03041
]
139373134
Protein phosphatases and associated proteins [BR:
ocla01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139373134
Spliceosome [BR:
ocla03041
]
Common components
Common spliceosomal components
SR proteins
139373134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
139373134
NCBI-ProteinID:
XP_070969367
LinkDB
All DBs
Position
18:18222045..18229909
Genome browser
AA seq
304 aa
AA seq
DB search
MSDNEKDFGERDSRSASRSVSPRGSGKSASRSPAHSPARSKDGSRHSRSKSHSRSRSKSR
SRSHRSSRRHYSRSRSRSHRRRSRSRSRSGEYRRRRSHSHSPMSNRRRHIGNRANPDPNC
CLGVFGLSLYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVREDANEAKER
ANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGSSSSSGGGGGGGSGGPSSSS
SRRSSKDYDRGGDRGYDRGYDRGYDRYDDRECYRSYRRRSPSPYYSRGAYRSRSRSRSYS
PRHY
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaacgaaaaggattttggcgagcgggactcgcggtccgcttccaggagtgtg
agcccaaggggttctgggaagtctgccagccgctccccggcccattccccagcccgctcc
aaagatggctccagacactccaggtctaagtcccactcccgatcccgctccaagtccagg
tctcgttcccacagaagctcccgcaggcattattcccgctctcgctcccgttcccaccgc
cgccgttcccgtagccgatcccgaagcggggaataccgccgccgtcggagccacagccac
tcccccatgtccaaccgccgcaggcacattggcaaccgggccaacccggacccaaactgc
tgcctgggtgtgtttggtctgagcctgtacaccacagagagagacctgagagacgtgttc
tccaagtacggccccctggctgacgtcagcatcgtctacgaccagcagtcacgacgctcc
cgcggcttcgccttcgtctacttcgaagtccgagaggacgccaatgaggctaaggagagg
gctaatggaatggagttggatggacggaggatcagggtcgatttctccatcactaaacga
ccacacactcctacccctgggatatatatgggacggcccacatatggtggcggcggcggc
agcagcagcagcagcggtggtggaggaggaggaggaagtggcggccccagctcaagctca
tctcgccgtagctcgaaggattacgaccgcggcggtgaccgtggttacgacagaggctat
gaccgtgggtacgatcgctatgacgaccgagagtgctacaggtcctacagacgcaggtct
ccgtccccgtactacagccgaggagcctaccggtctcgctcccgctcgcggtcttactcc
ccacgccattactga
DBGET
integrated database retrieval system
