Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373553
Help
Entry
139373553 CDS
T10872
Name
(RefSeq) protein Jumonji-like isoform X1
KO
K11478
protein Jumonji
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139373553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocla03036
]
139373553
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
139373553
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
139373553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
139373553
NCBI-ProteinID:
XP_070970300
LinkDB
All DBs
Position
18:complement(43978947..44071583)
Genome browser
AA seq
1308 aa
AA seq
DB search
MSKERPKRNIIQKKYDDIDGIPWSEERDVRKVLYLSLKEFKTAQKRQLGDGIGDGTKYTN
GSHARGQLNGSGQKGHNADGSRFQSTDGSSEYSEDGPAKKRPRLQAQRKFAQSQPNSPST
TPVKVSDTALPAPSAHIRDISRRKPKTEDFLTFLCLRGYSSWPNEGSSVLPSNMAYFGSS
QDEDALDDEEEYEDVKPDVSMASTSCQSTPRKGKPQGKHAVNGHVLNGPSKAPRDSPKPR
GKEWVQVRERSERAEARREQALSQLKATARGHTTNGLPHRRAVEELSKQVSKVNGVTRAS
QTGMHTAGAKKTKDFRLPSKTVNGLVTHTKGKQELVKKTKLNKRKHSTAATHKAHSNNRH
HNHLQRHQRLPLSNSGKAQNSKAKTSKQVLLSNGVHKVTNGGGVRFNGHLCAKQEVGRQG
REGLRNSKRRLEVAVAAIGAVADSQGKLVVLETNPNRKKTKQNQRSPLDGKTKHQTSPLE
TRSKKACQGKASVPNGHIVMETTPPPSLLAPPPPSTPLANPEPGRQRPKRASAGKLMFIR
QAQHRVQAASNPNHTLNRSTTSESPGHIPGHTPGHTPHKPTEPRPDREWEREKERDKERE
RAERSKASWAALGEAPEFCPTQREFQDPLVYLDSVREGAEPCGLCRVVPPADWRPECKLN
DEMRFVTQVQRIHKLGRRWGPNVQRLACIKKHLKSQGITMEDPPLIGGCEVDLARFFQLI
NDMGGMQQVMDLKKWSKLADLLRIPKSAQDRLAKLQESYLQYLLSYDSLSLEEHRRLERE
VLQEKEGLERRRGPLEGHTESSLTLPRYEPKNGLAGSLVQHSNGQLCSRLKELDSQQLKV
GRRRLFSQEKRNGEMTQQEEDEDEEKGVLSDQHKCIYKGKSVSLTNFFRIARNTMIMCFN
KEPGAAEVEQEYWRIVEQRHCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNN
SGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSIPAEEKV
KLDKVVHTLLQANGTPGLEMLEKNIMISPEVLCREGIKVHRTVQQSGQFVVCFPGTFVSK
VCCGYSVSETVHFATPQWMNLGYEAAKDLKCRHIAKPFSMEKLLYQIATAESKRENGHIL
TTISALLKDLRNIEMRQRQELYEAGLLSSARYGTHDNSLLPGDGRKKPRKWLALESSERR
CQTCQHLCYLSMVVQENENVVFCLECALRYVENHKSCRGLKMMYRYDEEQINSLVKQVCG
KALGKTTEKWNGASPIKPPPKRGPRKRETVEVSLSRLSSSHLSPAAVT
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatatcatccaaaagaaatacgatgatattgatggg
atcccctggtcagaggagagggacgtgaggaaggtgctctatctctccctgaaggagttc
aagactgctcagaaaaggcagctcggagacggcatcggcgatggaaccaaatacactaat
ggttcccatgcccgcgggcagctcaatggctcagggcagaagggccacaatgctgatggg
tcacggttccagagcaccgacggcagcagcgagtactctgaggatggccctgccaagaag
aggcccagactgcaagcacagaggaagtttgcccagtctcagcccaactctcccagcacc
accccggtcaaggtgtctgataccgccctgcccgcaccctccgctcacatcagagacatc
tccagacgaaaacccaagaccgaagatttcctcaccttcctctgcctgagaggttactcc
tcgtggccaaatgaagggtcatcagtgttgcccagtaacatggcgtactttgggagctct
caggatgaagatgcactggatgatgaagaggagtacgaggatgtaaagccagacgtcagc
atggcatctacgtcctgtcagtccacgcccaggaagggcaaaccccaagggaaacacgcc
gtcaatggccacgtgttgaacggccccagcaaggcgccccgagacagccccaagcccaga
gggaaggaatgggtgcaggtgagagagcgcagtgagagagccgaggcccggagggagcag
gccctcagccagctaaaggctacagccaggggccacactaccaacggactgccccacagg
agggccgtagaggagctcagcaagcaggtctctaaagtgaacggagtcacacgggcgtcc
cagacaggcatgcacacggccggtgccaaaaaaacgaaagacttcagactgccgtccaaa
actgtgaatggcctcgtcacacacaccaaaggaaaacaagaactggtcaagaaaaccaaa
ctgaacaagcgcaaacacagcactgctgctacccataaagcccatagcaacaatcgccac
cacaaccacctccagcgccaccagcgactccccctctccaactcaggaaaagcccagaat
agcaaagcaaaaacaagcaaacaggtgctattatccaatggggtgcacaaggtgaccaac
gggggcggagtgcgcttcaacgggcacctctgtgccaagcaggaggtgggcaggcagggg
cgtgagggactgaggaactccaagcggaggctggaggtggcggtggctgccatcggggcg
gtggctgactcccagggtaagctggtcgtcctggagactaaccccaaccgtaagaagacc
aaacagaaccagagaagccccctggacggtaagaccaagcaccagaccagccctctggag
acacgcagtaagaaagcgtgtcagggcaaggcctcggtccctaatggacacatcgtcatg
gaaaccacccctcccccctccctgctagccccaccccctccctccacaccactagccaat
ccagagccagggcgtcagcggcccaagcgagcgtcagccggcaagttgatgttcatcaga
caagcacagcaccgggtgcaggctgcctctaaccctaaccacacccttaaccgctcaact
acctcagagtcgcctggccacatccctggccacacccccgggcatacccctcacaaacca
acagagccccggcctgacagggagtgggaaagggagaaggagcgggataaagagagggag
agggcggagaggagcaaggcgagctgggcagcgttgggtgaggcaccagagttctgtccc
acccagcgggagttccaggaccccctggtgtacctggactctgtgcgggagggggcggag
ccctgcggactgtgtcgggtggttcccccggctgattggcgcccagagtgcaaactgaac
gatgagatgcgctttgtgacccaggtgcagcgcatccacaagctgggccgtcgctggggc
cctaacgtacagaggctagcctgcatcaaaaagcacctcaaatctcagggcatcaccatg
gaagaccccccactcatcggtggctgcgaggtggacctggctcggttcttccagctaatt
aatgacatgggcggcatgcagcaggttatggacctgaagaagtggagtaaactagctgat
ctgctgcggatccccaagtcagcccaggaccggctggccaagctgcaggagtcctacctc
caatacctactgtcctatgactctctgtccctagaggagcaccggcgcctggagagggag
gtgctgcaggagaaggagggcctggagcgccgcagggggcccctggagggccacacggag
agtagcctgaccctgccacgctacgagcccaagaacgggctggccggcagtctggtgcag
cacagcaacggtcagctgtgcagccggctgaaggagctggacagtcagcagctcaaggtg
ggacgccggaggctgttctctcaggaaaagaggaatggggaaatgacacagcaggaggaa
gatgaggatgaggagaagggggttctcagcgaccagcacaagtgtatttacaaggggaaa
tctgtatcgctcaccaacttcttcaggatagccaggaacaccatgatcatgtgttttaac
aaagagcctggggctgctgaggtcgagcaagaatactggaggatagtggagcagaggcac
tgccatgtggccgtgcattatgggaaagtggacaccaacacacacggaagtggcttcccc
gtgggaaagtcagagccattttctaaacatggatggaacctcactgtcctccctaataat
tctggatccattctgcggcatcttggagctgtgcccggggtcaccattccttggctgaac
attggcatggtcttttctacctcatgctggtctcgagaccaaaaccgccttccatacatt
gattacttacacactggtgctgactgcatttggtattctattcctgctgaggagaaggtg
aagcttgacaaggtggttcacacactgctgcaggccaacgggacccctgggctggagatg
ctggagaagaacatcatgatctctccagaggtgctttgtcgagagggtatcaaggtccac
cgcaccgtccagcagagcggtcagttcgtggtctgcttccccgggacatttgtgtccaag
gtctgctgtggctacagtgtgtcggaaactgtgcattttgccaccccacagtggatgaac
ctgggatatgaggctgctaaggacctgaaatgccggcacatagccaaacccttctccatg
gagaagttactctaccagatcgccacggccgaatccaaacgcgagaacgggcacattctg
actacgatctccgcccttctcaaagacctcaggaacatagagatgagacaacgacaggaa
ctgtacgaggcagggcttctgtcctctgcccgctacggaacacatgataacagcctgttg
cccggtgatggacgcaagaaacccaggaagtggctggcgctggagtcgtcagagagacgc
tgccagacttgccaacacctctgctacctgtccatggtggtccaggagaatgagaacgtt
gtcttctgtttggagtgtgctttgagatacgtggagaatcacaagtcctgcagaggcctc
aagatgatgtatcgttacgatgaggagcagatcaacagcttggtgaagcaggtgtgtggt
aaggccctggggaagacgaccgagaaatggaacggtgcaagcccaatcaaaccaccacct
aaacgcggaccccggaagagagagaccgtggaggtgtccctgtcccgcctctcctcttcc
cacctgtctcctgcagcggtcacatga
DBGET
integrated database retrieval system
