KEGG   Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139373597
Entry
139373597         CDS       T10872                                 
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
ocla  Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ocla00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139373597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ocla03041]
    139373597
Spliceosome [BR:ocla03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    139373597
 Complex B
    139373597
 Complex C
   U2 SnRNP specific factors
    139373597
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 139373597
NCBI-ProteinID: XP_070970384
LinkDB
Position
18:complement(47679850..47685221)
AA seq 501 aa
METILEQQRRYHEEKERLLDAKTKEMMHKKTTLREQINSDHRTRAMLDRYMDVSSTVREA
YEDKDGMRKDELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFDELVKARENP
TEETQNMVEFSDEEAYGRYLDLHDCYRKFINLKGAEKLEYISYLSSFDQLFDVSKDRKNA
EYKKYLEMLLEYLQDYTERVKPLLDQNDLYGKILGEFEKKWEMGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLESLDPSL
FAKNPKSKGPKKDTERNKEVAFLESQVYEYVEILGEQRQLTHENVQRKQARTGEEREEEE
EEQLSESESEDEDNEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPK
AFQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWSKLKSQKASERWQPDTEEEYE
DSSGNVVNKKTYEDLKRQGLL
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggagacgattttagaacaacaacgtcgctaccatgaggagaaggaaaggctgttggat
gccaaaactaaggaaatgatgcataagaaaaccacgttacgcgaacaaataaactcagac
catcgaacaagagcaatgttggatagatacatggacgtgagctcaactgtcagggaagca
tatgaagacaaagatggtatgaggaaggatgaactgaacgccatctcaggaccaaatgag
tttgcagagttctacaacagactaaaacagatcaaggagttccacaggaagcatcctaat
gagatctgtgtgcccatgtctgtggagtttgacgagctggtcaaggctagagagaaccca
actgaagaaacacagaacatggtggagttcagtgatgaggaggcgtacggacgctacctg
gatcttcatgactgctatcggaagttcatcaacctgaaaggggcagagaaactggagtac
atcagctacctttcctcatttgaccagctgtttgatgtctccaaggacagaaagaatgct
gaatacaaaaagtacttagagatgctactggagtaccttcaggactacacagagagagtc
aaacctctgctggaccagaatgatctctacggcaagatcctgggagagtttgagaagaag
tgggagatggggaccttccctggctggccaaaagagacgagcagtgctctgacacacgcc
ggagctcatctagacctttctgctttctcctcttgggaggagttggcttccttgggtctg
gacaggttgaagtctgcccttatggccctgggcctgaaatgtggaggaaccctggaagag
agagctcagaggctgtttagcaccaaaggaaaatccctggaatctctggatccctccttg
ttcgccaagaaccctaagtccaagggacccaagaaagacacagagcgtaacaaagaagtc
gccttcctggagtctcaggtttatgagtatgtggaaatcttgggggagcagaggcagctg
acccatgagaacgtgcagaggaagcaggccaggacaggagaggagagagaggaggaagag
gaggagcagctcagtgagagtgagagtgaagatgaggacaacgagataatctacaacccc
aagaacctgcctctcggctgggatggaaagcccattccatactggctgtacaaactccat
ggcctgaacatcaattataactgtgagatctgtggaaactacacgtacagaggacccaag
gccttccagaggcactttgcagagtggcgtcacgcccatggcatgcgctgcctgggaatc
cccaacacggctcactttgccaacgtcacccagatcgaggatgctgtctctctatggtca
aagctgaagtcacagaaggcatcagagcgctggcaaccagatacagaggaggagtacgag
gactccagtggaaacgtggtcaacaagaagacctacgaggacctgaagagacagggtctg
ctgtag

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