Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376631
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Entry
139376631 CDS
T10872
Name
(RefSeq) phakinin-like
KO
K10379
phakinin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ocla04812
]
139376631
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Others
139376631
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
CCDC22_CC
CCDC39
Sec8_N
Laminin_II
AAA_13
ATG17_like
Baculo_PEP_C
YfjL_C
FKBP15
DUF7310
PUMA_CC
TPR
ANC1_spectrin
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
139376631
NCBI-ProteinID:
XP_070975531
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All DBs
Position
20:7107456..7114361
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AA seq
461 aa
AA seq
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MPLPRRRSSFLNQPAAKERPGSANTRVGTAGITIAPRGVFVGTAPTGVTSSMGTRVSRRA
LGISSVFLQGLRSTAVPVMPHGVGTGGRQYPGGAENLNSCLMEYRDKVHALEQLNQQLEE
QINHCLDRKVSSAGAWGPLRQDWEDVYRHVSESILANARLMLQTENVQANAEDFKDRYEN
EQPFRKAMEEEISSLYKVIDDANLTKSDLESQMDSMRAELRDLACNHEEDVRVLYKQMAG
GEMDELDAPIETNLDQILAYIRSHWERVIEKNRAETDAYLECKQAESVGSKLSREEEELE
SLKTECNDAGCKIQSLQAQTESIRALKRGLENSLNDARHWHDIELQNLGSVIGKLESELG
DVHGDVEQQRRDYETLLGNKMRLELEIGTYHGILDGEESRYHPSMCTGASEPEGKQTPLP
PHSEPSGNTALQGKVYSPVQNTRSKALFMTSKWLYCDGKFN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccgagacgtcgatcctccttcctgaaccaacctgctgccaaggagcgccca
ggtagtgccaacaccagggttggcaccgcaggcatcaccattgccccccggggagtcttt
gtggggacggcccccacgggcgtcacctccagcatgggcacgcgcgtgtcacgacgagcc
ctgggcatcagcagtgtgttcctgcaggggctgaggagcacggccgtgcctgtgatgccc
cacggggtcgggaccggtggcaggcagtaccccgggggtgccgagaacctcaacagctgc
ctgatggagtacagggacaaggtgcacgccctggagcagctcaaccagcagctggaggag
cagatcaatcactgcctggatcgtaaggtgtccagcgctggagcctggggtcccctcaga
caagactgggaggatgtttacagacatgttagtgagtccatccttgccaatgccaggcta
atgctgcagacagagaatgtgcaggccaacgctgaggacttcaaggaccggtatgagaat
gaacagccgttcaggaaggcgatggaggaagagatcagctctctgtacaaggtgattgac
gacgccaacctgaccaagtcggacctggagagccagatggacagcatgagggctgagctt
cgggacttggcctgcaaccacgaggaggacgtgagggtgctctacaagcagatggcaggt
ggcgagatggacgagctggacgctcccattgagaccaatctggaccagatactggcctac
attcgctcccactgggaaagagtcatcgagaagaaccgtgccgagaccgacgcctatctg
gaatgcaagcaggcggagagtgtgggcagtaaactgagccgtgaggaggaggagctggag
agtctgaagacagagtgtaatgatgctggctgtaagatccagagtctgcaggcccaaact
gagtctatcagagcactgaagcgaggtctggagaactccctgaacgacgccaggcattgg
cacgacatcgagctgcagaacctgggatccgtcatcggcaagctggagtcggagctgggt
gacgtccacggcgacgtcgaacaacagcgtcgcgactatgagacgttgctgggaaacaaa
atgcgtctggagctggaaatcggcacctaccacggcatcttggacggggaggagagccgc
taccacccctccatgtgcacaggtgcatcagagcccgaggggaaacaaactccccttcct
ccccattcagagccctctggcaacacagccctccaaggtaaagtctacagcccggttcaa
aacacaaggagcaaggcactctttatgacctcaaaatggctctattgtgatggcaagttc
aattga
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