Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139376847
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Entry
139376847 CDS
T10872
Name
(RefSeq) ATP-binding cassette sub-family G member 8
KO
K05684
ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2)
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139376847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139376847
Transporters [BR:
ocla02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG5, 8 subgroups
139376847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
Ig_TMEM131homol_3rd
nSTAND1
RsgA_GTPase
AAA_29
ATP-synt_ab
SMC_N
AAA_23
NB-ARC
Motif
Other DBs
NCBI-GeneID:
139376847
NCBI-ProteinID:
XP_070975905
LinkDB
All DBs
Position
20:70454907..70473630
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AA seq
722 aa
AA seq
DB search
MISVYVSLGEERRGKTRERYRLRTNQAHGALTPISELPPPPTTLQTMYTGGTDNRPDPET
GIVTGGPPQTRGDTELFSSSEEDSSLYFTYSGGRNEIEVSNLHYEVDTAAQIPWYEKLSE
FKMPWEMKGDKQTAINKLNLRVCSGQMLAIIGSSGCGKTSLLDVITCRDEGGSMTSGQVL
INGQPSNPKLVRKTIAHVRQDDRLLPHLTVRETLAFVAKLRLPTNFSQKQRDQRVDDVIA
ELRLRQCAHTRVGNDLVRGVSGGERRRVSIAVQLLWNPGILILDEPTSGLDSFTAHNLVI
TLSRLARGNRLVLLSIHQPRSDIFQLFDLVVLLSSGSAVYCGPAKDMVPYFTALGHPCPR
YCNPSDFYVDLISIDRRSPEREAECLERARVLSAQFVEKVRGTDDFMWKPEEPSTTLEAI
TTTQSATQEEVITISKQKDRLPGRLHQFTILIRRQVHNDFRDLVTLLVHGFEALLMSLLI
GFLYFGAGEERLSIQDTVALLYMIGALTPFAVVLDVIAKCHTERAMLYHELEDGMYNVTS
YFFAKVLGELPEHCVFTLVYGLPIYWLAGLNQAPDRFLLNFLLVWLMVYCSRSMALFVAA
ALPTLQTSAFMGNSLFTVFYLTGGFVISLENMWLVASWFSHASFMRWGFEGMLQVQFRGL
KYPVSIGNFTFNIDGIHVVEAMDMNQYPLYSCYLVLIAVVVGFMLLYYLSLKFIKQKSSQ
DW
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagtctatgtcagcctgggagaggagaggagagggaagaccagggagagatac
agactcagaaccaaccaggcacatggggcactgacccctatatcagaacttccaccaccg
cctacaactctacaaaccatgtatactggagggacagacaacaggccagatccagagaca
gggatcgttaccggtggccccccacagacgagaggagacactgagctgttctcctcttct
gaagaggacagtagcctgtacttcacctacagtggaggtcgcaatgagatagaggtcagc
aacctgcactatgaggtggacacggctgctcagatcccgtggtatgagaagctctcagag
tttaagatgccctgggagatgaagggagacaagcagacagccataaacaaactcaacctg
cgagtctgcagtggccagatgctggcgatcatcggcagctcaggttgtggaaagacctca
ctgctggacgtcataacgtgtcgtgatgagggtggctccatgacgtctggccaagtgctt
atcaacgggcaacctagcaacccaaagctggtgaggaagaccatcgcccatgtccgccag
gacgaccgcctgctgcctcaccttactgtgagggaaacactagccttcgtggctaagcta
cggctacccacaaacttcagccagaaacagagggaccagagggtggatgacgtcattgca
gagctgcgtctgcgacagtgtgcccacacccgggtgggcaatgacttggtgagaggagtg
tctgggggagagaggaggagggtcagcatcgctgtgcagctgctctggaaccctggtatc
ctgatcctagatgagcccacgtcggggctggacagcttcacggcccataacctggtgatc
actctgtcccggttggcccgggggaaccgcctggtactgctgtccatccaccagccacgc
tcagacatcttccagctctttgacctggtggtcctgctctcctctggctcagccgtctac
tgtgggcctgctaaagacatggttccatacttcacagccctgggacacccctgcccccgc
tactgcaacccctccgacttctatgtggatctgatcagtatagaccggcgcagcccagag
agagaggctgagtgtctggagagggccagggtgctgtcagcccagtttgtggagaaggtg
agagggacagatgacttcatgtggaagccagaggagccaagcacaaccctggaggccatc
acgaccactcagtccgcaactcaggaggaagtgatcactatatccaaacaaaaggaccgc
ctgccaggccgactacaccagttcaccatcctcatcaggcggcaggtgcacaatgacttc
agagacctggtcactttgctggtgcacggcttcgaggctctgctcatgtctctgctgatt
ggattcctgtacttcggggcgggggaggagcgtctgtcgatccaggacacagtcgccctg
ctctatatgatcggagctctcaccccattcgccgtggtcctggacgtcatagcaaagtgt
cacacagagagagccatgttgtaccatgagctggaggacggcatgtataacgtcacatcc
tacttctttgccaaggtcctgggggagcttccggagcactgtgtgttcacgttggtctac
ggcctacccatctactggctggctggcctgaaccaggccccggaccgcttcctgctcaac
ttcctgctggtgtggctcatggtgtactgcagccgcagcatggctctgtttgtggctgca
gccttacccaccctgcagacatcagccttcatgggcaattctctgttcactgtgttctac
cttactggaggcttcgtcattagcctggagaacatgtggttagtggcgtcctggttctcc
catgcctccttcatgcgctggggctttgagggcatgctgcaagtccagttcaggggactc
aagtaccctgtctccatcggcaacttcacattcaacatcgatggcatacatgtggtggaa
gctatggatatgaaccagtaccctctctactcctgctacctggttctcattgctgtcgta
gtgggcttcatgctgctctactacctatcactcaaattcatcaagcagaagtccagccag
gactggtga
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