Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139378880
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Entry
139378880 CDS
T10872
Name
(RefSeq) protein PALS2-like
KO
K28619
MAGUK p55 subfamily member 6
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139378880
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139378880
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
PDZ domain-containing proteins
MAGUK family proteins
139378880
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
SH3_2
PDZ
SH3_1
PDZ_2
PDZ_6
SH3_9
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
139378880
NCBI-ProteinID:
XP_070977557
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All DBs
Position
2:5404229..5440924
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AA seq
538 aa
AA seq
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MQQVLDNLRELPPTTGAKDIDLLFLKGIIESPIVRSLAKAHERLADVKLEAVRDNNQQLV
SEILDSLTGLSSRDASAEELANILQEPHFKSLIEAHDKVAAKCYEMPSEVNSNATATGPL
MPADAVRIIGIQKKAGEPLGVTFRVERGELVIARILHGSMIDRQGMLHAGDVIREVNGRE
VGSDPKELLELLRDCQGGVTLKILPSYRDTPAPPQVHLKPHFNYSPATDNLIPCKEAGLA
FSKGDVLHIVNREDPNWWQAVNIVGGATGLIPSQFLEEKRKAFVRREWNGSGVLCGTLTG
KKKKKKMMYLMSKNAEFDRHELQIYEEVAKMPPFQRKTLVLIGAQGVGRRSLKNRLIVIN
PLLYGTTVPFTSRPAREEERDGQSYCFVSRSQMETDIKARRYLEHGEYDGNLYGTKMNSI
HEVVDAGRTCILDVNPQALKQLKTAEFMPFVVFVAAPQLDTLRAMHKAVVDAGLTTKLLT
ETDLKKTVDESARIRRAYSHYFDLTIVNDNLDKAFEQLQAAVEQLCSEPQWVPVSWVY
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggtgctggataacctgagagaactgcctcccaccacgggggccaaagacatc
gacctcctcttcctcaagggaatcatagagagccccatagtccgctccctcgccaaggcc
catgagaggctggcggatgtgaagctggaggctgtgagagacaacaaccagcagctggtc
tcagagatcctagactccctcacaggactgagtagtagagacgcctccgccgaggaacta
gccaacatcctccaggaaccacacttcaagtctttgattgaggcccatgacaaggtggca
gctaaatgttatgagatgccgtcggaggtgaacagtaatgccacggcgaccggccccctc
atgcccgccgacgctgtcaggataattggcattcagaagaaggctggcgaaccactgggc
gtgacgttcagggtggaacgcggggagctggtgatcgccaggatcctgcacggcagtatg
atcgaccggcagggcatgctgcacgcgggcgacgtgatcagggaggtgaacgggcgcgag
gtgggcagcgatcccaaggagctgctggagctgctgagggactgccaggggggcgtcacc
ctcaagatcctgcccagctaccgcgacactccagcacccccacaggttcacctgaaaccc
cactttaactacagcccagccacagacaacctgatcccctgtaaggaggctggcctggcc
ttctctaaaggagatgttttgcacattgtcaacagagaggaccctaactggtggcaggca
gtcaacattgtgggaggagccacaggactgatccccagtcagttcttagaggagaagagg
aaggcctttgtgaggagagaatggaatggatcaggtgttctctgtgggacactaacagga
aagaagaagaagaagaagatgatgtacctgatgtccaagaatgcagagtttgaccgccac
gagctgcagatctacgaagaggtggccaagatgcctccattccagaggaagaccctggtt
ctgattggtgctcagggagtgggccggcgcagtctgaagaacagactgatcgtcatcaac
cccctgctctatggaaccaccgtccccttcacgtctcggcctgctcgggaggaggagaga
gacggccagtcgtactgctttgtgtcccggtcccagatggagacagacattaaggcccgt
cgctacctggagcatggagagtacgatggaaacctctacggaaccaagatgaactccatc
cacgaggtggtggacgcaggacgtacctgcatactggacgttaacccacaggcactgaag
cagttgaagacagcagagttcatgccgtttgtggtgtttgttgctgctccacaactggac
acactaagagctatgcacaaagccgtggtggacgctggactcaccaccaaactgctcacg
gagacagatctgaagaagacggtggatgagagcgccaggatccgccgggcctacagccac
tactttgacctgaccatcgttaacgacaacctggacaaggcctttgagcagctgcaggcg
gccgtggagcagctgtgttctgagccccagtgggtccctgtcagctgggtgtactga
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