Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139382407
Help
Entry
139382407 CDS
T10872
Name
(RefSeq) Golgi SNAP receptor complex member 1
KO
K08495
golgi SNAP receptor complex member 1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
139382407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139382407
Membrane trafficking [BR:
ocla04131
]
SNARE
SNAP-25[N] (Qb)
Gos1 (Gos28)
139382407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
139382407
NCBI-ProteinID:
XP_070982535
LinkDB
All DBs
Position
24:17380316..17426963
Genome browser
AA seq
248 aa
AA seq
DB search
MAGGSSNYWEDLRKQARQLENELDLKLVSFSKLCTSYSSSRDGRRGDSNSDTAPLLNNST
QDRMFETMSGEIEQLLAKLTGVNDKMAEYTSTPGVTSLNAALMHTLQRHRDILQDYTHEF
HKTKANFLAIREREDLLGSVRKDIETYKSGSGVNNRRTELFLKEHEHLRNSDRLMDDTIS
IAMATKENMTSQRGLLKSIQSRVNTLANRFPAINNLVQRLNLRKRRDSLILGGVIGVCTI
LLLLYAFH
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaggaagcagcaactactgggaagatttgcgaaagcaggccaggcagctggag
aatgagttggacctgaagctggtgtcttttagtaaactgtgtacaagctacagcagctcc
agagatggccgtcgaggagacagcaactcagatactgctcccctcctcaacaactcaacg
caggacagaatgtttgagaccatgtctggggagattgaacagctgctggccaaactcaca
ggtgtaaatgacaagatggctgagtacaccagcaccccgggggtgacgtcccttaacgca
gccctgatgcacacgctccagagacacagagacatcttgcaagactacactcacgaattc
cacaaaaccaaagccaacttccttgccatccgggagagagaagatttgctggggtccgtc
cgcaaagacattgagacatacaagagtggctcaggagtgaacaacagaagaacagaactg
tttctgaaggagcatgagcacctgagaaactctgaccgcctgatggatgacacaataagt
attgccatggcgaccaaggagaacatgacatcccagagagggctattgaagtccatacag
agcagagtcaacactctggccaatcgtttcccagccatcaacaacctcgtccagcgactc
aacctgcggaagagacgagactccctaatcctgggcggcgtcatcggcgtttgcaccatc
ctcctgctgctctacgccttccactga
DBGET
integrated database retrieval system
