Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139383177
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Entry
139383177 CDS
T10872
Name
(RefSeq) septin-5-like isoform X1
KO
K16943
septin 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139383177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139383177
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139383177
04812 Cytoskeleton proteins [BR:
ocla04812
]
139383177
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
139383177
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Sperm associated proteins
139383177
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
139383177
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
AIG1
Ras
VapE-like_dom
ABC_tran
Roc
AAA_16
nSTAND1
AAA_22
AAA_29
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
139383177
NCBI-ProteinID:
XP_070983669
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Position
24:complement(17856208..17870540)
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AA seq
465 aa
AA seq
DB search
MQQDPHHSVDHPHPPLGGYEHSPDHEHFHPVDREAEGGDTPGTPTFLRPPTAGGRAQSDN
QGVGRLQLGGCGMVDHYDMQSPLSPTRPKSPWGRFDPYDFPEDQDKDYVGFATLPNQVHR
KSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYKDRKLLNAEERITQTVEITKHTVDIE
EKGVKLKLTIVDTPGFGDAVNNTECWKSVADYIDQQFEQYFRDESGLNRKNIQDNRVHCC
LYFISPFGHGLRPLDVEFMKALHEKVNIVPILAKADTLTPTEVKKKKFKIREEIQQYGIK
IYQFPDCDSDEDEDFKQQDQELKDSIPFAVIGSNTVVEAKGKRVRGRLYPWGIVEVENSA
HCDFVKLRNMLVRTHMQDLKDVTRETHYENYRAHCIQSMTRMVVKERNRNKLTRESGTDF
PIPVIPSTTDTETEKLIREKDEELRRMQEMLTKIQEQMHTQKEAY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagacccccaccacagcgtggaccaccctcacccgcctctgggcggctatgag
cacagccccgaccatgagcacttccacccggtggacagggaggcagagggtggcgacacc
cccgggacgcccacctttttgcggccccccacggcgggtggcagggcccagtcagacaac
cagggcgtagggaggctgcagttgggtggatgtgggatggtggatcactatgacatgcag
tctcccctcagtcccaccaggcccaagagcccctggggccgctttgatccctacgacttt
ccagaggaccaagacaaggactatgtgggctttgccacactgccaaaccaggtgcaccgt
aagtctgtcaagaagggctttgacttcaccctgatggtagcaggggagtctggtctgggc
aagtccaccctggtcaacagcctcttcctcacagacctctacaaggacaggaaactactc
aacgctgaggagcggatcactcagacagtggagatcactaaacacacagtggacattgag
gagaagggcgtcaagctgaagctcaccatcgtagacacccctggctttggagacgctgtc
aataacactgaatgctggaagtcagtggcggactacattgaccagcagtttgagcagtac
ttcagggacgagagtggactgaacaggaagaacatccaagataacagagttcactgctgc
ctctacttcatctctcccttcggacacggcctgaggcctctggatgtggagtttatgaag
gcccttcatgagaaggtcaacattgtgccaatcctggccaaggcagatacactcacaccc
actgaggtcaagaaaaagaaattcaagatccgagaggagatccagcagtatgggattaag
atctaccagttcccagactgtgactctgatgaggatgaggacttcaaacagcaggatcag
gagctcaaggacagtataccgtttgcggtgatcggcagcaacacggtggtggaggccaaa
gggaagagggtccggggtcgtctttatccctggggcatcgtggaagtggagaactcggcg
cactgtgactttgtgaagctgaggaacatgttggtgaggacacacatgcaggacctgaag
gatgtgacacgggagacccactatgagaactacagggctcactgcattcagagcatgacc
cgcatggtggtgaaggaacgcaaccgcaataaactgaccagggagagcggcacagacttc
cccatccctgtgataccaagtaccacagacaccgagacggagaagctgatccgagagaaa
gacgaagagttgcggcgaatgcaagagatgctcacaaagatccaggaacagatgcacacg
cagaaggaggcctattaa
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