Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139384673
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Entry
139384673 CDS
T10872
Name
(RefSeq) cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04514
Cell adhesion molecule (CAM) interaction
ocla04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
139384673
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
139384673
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ocla04515
]
139384673
04090 CD molecules [BR:
ocla04090
]
139384673
Cell adhesion molecules [BR:
ocla04515
]
Cadherins
Major cadherins
139384673
CD molecules [BR:
ocla04090
]
Proteins
139384673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_2
TMEM132_C
Motif
Other DBs
NCBI-GeneID:
139384673
NCBI-ProteinID:
XP_070985596
LinkDB
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Position
26:complement(8617680..8630880)
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AA seq
765 aa
AA seq
DB search
MMRQSAWRQMTGPEMWMGLFALAVTLSLTMAEHVVQRPALQTSPVLHRHKREWLWNNLYV
EEERPTNKQYYIGKLKSTKSGDRTHYVIKGEGANTIFKVDEKGHIYVTERLDREEKSKYL
LSAKLFDTSNILVEKVEEFVILVTDINDNDPVFTKSFNASIKERSKSGTKVIEVTATDAD
DPTTANGELAYTLLEGGDFFNIDNTTGIITTKYENLDRETQSSYVVVVQAQDLRGLKQGG
TATTSVTIAVSDINDNIATFTKSSYVFSVKEDMKRGQRIDTIVLEDRDEIQNKDPIFTIE
PPSDTFEMERSQIKDGNLMLKQGLDYETKSSYTFFVHVRENHLQSPVDNKDNPVIKAQVT
IQVLDVDEQPEFSKSIYNFNVIEEIMVNNIGVVSARDPDKANKAIRYSMEDKDSPIGINP
ITGQLFTVRKLDRELVANHMFQVKAKEEPNGLESFVNVNILVIDINDNKPELSIEEIFVC
ENDMAGTVIGTISATDKDYNLPAFSFTLVKPNGNFSVVDNNDNTSNIVLKHGGFSLEDSR
DYVIEIGISDGGRPPMSSITTLPIKVCRCDNKRIHTQCKAAQLKMGVGVYTLIPILCILT
ILIIVILIAMRKRHQKDALVTLGKSEIHEQLVTYDEEGGGEMDTNGYDVSILTSARNDGS
MSMRQGPSLYAMVKKPPTACKGDMAVMIEVKKDEADHDRDGIPYDTLHIYGYEGPESLAG
SLSSLDSSSTGSSLDYDFLNDWGPRFRTLAELYGVDGSEGSDSLY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatgagacagtctgcatggaggcagatgactgggccagagatgtggatgggtctcttt
gccttggccgtgaccctcagtctaaccatggctgaacatgtggtccagaggccagcactc
caaaccagcccagttctccacaggcacaagagagagtggttgtggaacaacctttacgta
gaggaggaaaggccaaccaacaaacaatactatatcggaaagttaaagtcaactaaatct
ggtgacaggacacactatgtcattaaaggagaaggtgccaacactatcttcaaagtggat
gaaaaaggacacatctatgtcactgaacgattggatcgagaggagaaaagcaaatacctt
ctaagtgccaagctgtttgatacgagcaacatattggtggagaaagtggaggagtttgtg
atcctggttactgacatcaatgacaacgatccagtgtttaccaaatcgttcaacgcttct
atcaaagagagatccaaaagcggaactaaagtgatagaagtcactgccactgatgcagat
gatccaacgactgcaaatggagaacttgcttacacattattagaggggggagatttcttc
aatatagacaacacaacggggattatcaccaccaagtatgagaacctggaccgtgagacc
cagagtagctatgtggttgtggttcaagcccaggatctgagaggacttaaacaaggaggc
accgccaccacctctgtcacaatcgcagtcagcgacatcaatgataacatagccacattt
accaaaagttcctatgtatttagtgtgaaagaggacatgaagcggggacagagaatagat
accatagtcctggaggacagagatgagatccagaataaagacccaatcttcaccatagaa
cctccatctgacacctttgaaatggagcgcagtcagatcaaagacggcaacctcatgctg
aaacagggactggattatgaaaccaagagcagctacacgttctttgtgcacgtgagggag
aaccacttgcagtcccctgtggataataaggacaatccagtgatcaaggcccaggtgacc
atccaggtgctagacgttgatgagcagccagaattcagcaagagcatctacaactttaat
gtgatagaggaaattatggtcaataatattggagtcgtttcagccagagaccctgataaa
gccaacaaggccataaggtattccatggaggacaaggacagtcccattggtatcaacccc
ataactggacaacttttcacagtgaggaagctggatcgggagcttgtagcgaatcacatg
ttccaggttaaagctaaggaggaacccaatggactggaatcttttgtgaacgtcaacata
ctggtcattgatatcaatgacaacaaaccagagctgtccattgaagagatatttgtttgt
gaaaatgatatggctggcacggtgattgggaccataagtgcgacagacaaagattataat
ttgcccgcattcagcttcacattggtgaagccgaacggcaacttttcggtcgtcgataac
aacgacaacacatctaacatagtcctgaaacatggaggcttcagcctggaggactccagg
gattatgtaatagagattgggatcagcgatggaggcaggcctcccatgagcagcatcacc
actctgcctatcaaagtgtgcaggtgtgacaacaagaggattcacacccagtgcaaagca
gcccaactaaaaatgggtgtgggtgtctacaccctgattcctatactgtgcatcctgact
attctgatcatagtgatcctgatcgctatgagaaagcgtcaccaaaaggacgccctggtc
actctgggtaagagtgagatccacgagcagctagtgacatacgacgaggagggcggtggg
gagatggacaccaacggctacgacgtgtccatcctgacctcagctcggaatgacggcagc
atgagcatgaggcagggccccagcctttacgccatggtgaagaaaccgccaaccgcgtgc
aagggagacatggccgtgatgatcgaggtgaagaaagacgaagctgaccatgacagggat
gggatcccctacgataccctgcacatctacggctacgaggggccagagtccctggctggt
agcctcagttcgctggatagttcatccactggctctagccttgactatgacttcttaaat
gactggggccctcgcttcagaaccctggctgagctctacggggtagatgggtctgaggga
agtgactccctgtattga
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