Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139385444
Help
Entry
139385444 CDS
T10872
Name
(RefSeq) septin-5-like isoform X1
KO
K16943
septin 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139385444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139385444
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139385444
04812 Cytoskeleton proteins [BR:
ocla04812
]
139385444
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
139385444
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Sperm associated proteins
139385444
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
139385444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
RsgA_GTPase
MMR_HSR1
GTP_EFTU
VapE-like_dom
AAA_16
ABC_tran
nSTAND1
AAA_29
AAA_22
Motif
Other DBs
NCBI-GeneID:
139385444
NCBI-ProteinID:
XP_070986594
LinkDB
All DBs
Position
27:complement(18541645..18571478)
Genome browser
AA seq
577 aa
AA seq
DB search
MEDSDREAHSSSDDQDSAPPSPGHTRDHHHQTEQHSSHSKDDSEDSELENIMQQDPHHNG
GHPHPHLPLPGYEHSPDHEHPHPVDREAEGGDSPPNTPGTPTSGTPPFLRPPTAGGRAQS
DNQCVGRLQLGGGGMMDHYDMQSPLSPTRPKSPWGRFDPYDFPEDQDKEYVGFATLPNQV
HRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYKDRKLLNAEGEAAILVSHLLNKLM
HDFKWPAAEEMCVLTPERITQTVEITKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTECWK
SVADYIDQQFEQYFRDESGLNRKNIQDNRVHCCLYFISPFGHGLRPLDVEFMKALHEKVN
IVPILAKADTLTPTEVKKKKFKIREEIQQYGIKIYQFPDCDSDEDEDFKQQDQELKDSIP
FAVIGSNTVVEAKGKRVRGRLYPWGIVEVENSAHCDFVKLRNMLVRTHMQDLKDVTRETH
YENYRAHCIQSMTRMVVKERNRNKLTRESGTDFPIPVIPSTTDTETEKLIREKDEEVQRR
QSEHEPEQEHSHDEHSDRPLEPHSDPGLDPGPEPEAS
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtgaccgtgaggctcactcatcatcagatgaccaggactctgccccgcca
tcccctggccacaccagggaccaccaccatcagaccgaacagcactcaagccattccaag
gacgactctgaagactctgagttggagaacattatgcaacaagacccccaccacaacggg
ggccatccacacccccacctgcctcttcccggctatgagcacagccccgaccatgagcac
ccccacccggtggacagggaggcggagggtggcgacagccccccgaacacccccgggacg
cccacctctgggaccccaccgtttttgcgcccccccacggcaggtggcagggcccagtca
gacaaccagtgcgtagggaggctgcagctgggtggaggtgggatgatggatcattatgac
atgcagtctcccctcagtcccaccaggcccaagagcccctggggccgctttgatccctac
gactttccagaggaccaagacaaggaatatgtgggatttgccacactgccaaaccaggtg
caccgtaagtctgtcaagaagggctttgacttcaccctgatggtagcaggggagtctggt
ctgggcaagtccaccctggtcaacagcctcttcctcacagacctctacaaggacaggaag
ctactcaacgctgagggtgaggcggccattttggtgtctcatcttctgaataaattaatg
catgattttaaatggccagctgctgaggaaatgtgtgttttaactccagagcggatcact
cagacagtggagatcactaaacacacagtggacattgaggagaagggggtcaagctgaag
ctcaccatcgtagacacccctggctttggagacgctgtcaataacactgaatgctggaag
tcagtggcggactacatcgaccagcagtttgagcagtatttcagggacgagagtggactg
aacaggaagaacatccaggataacagagtccactgctgcctctacttcatctctcccttt
ggacacggtctgaggcctctggatgtggagtttatgaaggcccttcatgagaaggtcaac
attgtgcccatcctggccaaggcagacacactcacacccactgaggtcaagaaaaagaaa
ttcaagatccgagaggagatccagcagtatgggattaagatctaccagttcccagactgt
gactctgatgaggatgaggacttcaaacagcaggatcaggagctcaaggacagtatacct
tttgcggtgatcggcagcaacacggtggtggaggccaaagggaagagggtccggggtcgt
ctctacccctggggcatcgtggaagtggagaactctgcacactgtgactttgtgaagctg
aggaacatgttggtgaggacacacatgcaggacctgaaggatgtgacacgggagacccac
tatgagaactacagggctcactgcatccagagcatgacacgcatggtggtgaaagaacgc
aaccgcaataaactgaccagggagagcggcacagacttccccatccctgtgataccaagt
accacagacaccgagacggagaagctgatccgagagaaagatgaagaggtacaacgacga
caatcagagcatgaaccagagcaagagcacagtcatgatgagcactcagaccgaccccta
gaaccccactctgacccaggcctagacccagggcctgaacctgaggcctcttga
DBGET
integrated database retrieval system
