Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139386322
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Entry
139386322 CDS
T10872
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139386322
Enzymes [BR:
ocla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139386322
Ubiquitin system [BR:
ocla04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
139386322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
139386322
NCBI-ProteinID:
XP_070987946
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All DBs
Position
27:2094102..2119903
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AA seq
468 aa
AA seq
DB search
MEEDPNIVNRNTELDDILRQISELDKWRNIFNSRGLELQDCIIKRPLERIKLEEESEDGT
GRPPSTAQPPCGNTNLSTVPYSIPRALTVSPSLGGLPITPELAGNLRKILFGNTFYVFNY
EWKKSFFKFREPYSNLSYALEAERGGSRAIQMVVQANIIKYLLFTRQTNSDCCRLQSLSE
VGEKEQERALAVALTDILWAAGEERSATISLVTSDYCFTPHLDYKLDNFTERLQLFSFNK
KEDVKKFVHEHIQCFEDEGSHGVILFLYSLIFSRTITRLREDLDCTTSHLLHLSLGNFVC
RQALMNLLLTGRASPNVFNGTLQCGDDGSPLEKPLHGVLARSAVGYLHWSRELLERTKLP
MVGSMLKTPKLPIWVCSINGTYSVLFSPNRSLLSDWKMEHLFHMYFYNGQPSQQSTALLT
IDTHSHHWEVGIKDTQGDPEKRFPSVEMAVRTKWEGAAIDWNGTMPFF
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatcccaacattgtgaaccgcaacaccgagctggatgacatcctcagacaa
atatcagagctggacaaatggagaaacatcttcaactcccgtgggttggaattacaagat
tgtatcattaaaaggcctctggagaggattaagcttgaggaggaaagcgaggatggcaca
ggcaggccaccgtccacagcacagccgccttgtggaaacaccaacctatcgacagtgccc
tactctatcccccgggccctgactgtctctcctagcctaggagggctccctatcacaccc
gagttagctgggaacctcaggaagattttgttcggcaatactttttacgtcttcaactat
gagtggaagaagtccttcttcaaattcagggagccctactccaacctatcctatgccctg
gaggccgaaagaggaggatcccgtgccattcaaatggtggtccaagcgaacattatcaaa
tacttgctcttcacccgccagaccaactcagactgttgcagactgcaaagtctgagtgag
gtgggtgagaaggagcaggagagggccctggccgtcgctctgactgacattctgtgggca
gctggtgaggaaaggagcgccaccatctccttagtgacatcagactactgtttcaccccc
cacctggactacaaactggacaacttcactgagagactacagctttttagtttcaacaag
aaagaggatgtcaagaaatttgtccatgagcacatccagtgttttgaagatgaggggagt
catggagtcatcttgtttctctacagcttaatcttttcaaggactatcaccaggttgagg
gaggatcttgactgtaccacctcccacttgcttcatttgagccttggcaactttgtgtgt
cgtcaggcactaatgaatcttctgctaactggccgagccagtcccaatgtattcaatgga
actctgcagtgtggtgacgacggcagccctctggagaagccgcttcacggggtcctggct
cgcagtgccgtaggctacctgcactggagccgcgagctgctggaacgtacaaagctgccc
atggttggaagcatgctgaaaacaccaaagttgcccatttgggtgtgcagtatcaatggc
acctacagcgtcctcttcagtcccaaccgctccctgctctctgactggaagatggagcac
ctgttccacatgtacttctacaatggccagccatcgcaacaaagcacagccctgctgacc
attgacactcactcccaccactgggaggtagggatcaaggacacccagggagacccagag
aagaggtttccctctgtagagatggccgttaggaccaaatgggagggagctgccatcgac
tggaacggaaccatgccttttttctga
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