Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139387480
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Entry
139387480 CDS
T10872
Name
(RefSeq) rho guanine nucleotide exchange factor 18-like
KO
K21066
A-kinase anchor protein 18
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
139387480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139387480
Membrane trafficking [BR:
ocla04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
139387480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
PH_13
BppL_N
Motif
Other DBs
NCBI-GeneID:
139387480
NCBI-ProteinID:
XP_070989818
LinkDB
All DBs
Position
28:complement(40870318..40914247)
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AA seq
1074 aa
AA seq
DB search
MDDLDAVRGLSPRPAPPPEDSVSLSTSSTDTINLEDGHYSALRAELEADAQDLEGESWSV
AVDQQHINSLHQDAVKRQDVIYELIQTEVHHVRTLKLLLSVYQYELRHSLHMEDTRLERM
FPQIDSLLHIHQHFLWCLRDGRDRHNHHTVTQLGDILINQFSGEMGERMKESYGVFCSHH
ADAVSLYKEQLQNNKKFQNLIMKIGRLSIVRRLGVPECILLVTQRITKYPVLVERILQNT
EADSEEHGALIQALVLIKETISAVDSQVHDYERASRLRDIGGRLEPRSHGRWKDGRVFTR
EDLAEGLRTLLHEGTVSCRVANGRLKDIHAVLLSDVLLLLQKEKDQKLIFANVDNKTSVI
SLQMLIVREMAHEDKAMFLISASSSMPEMYEIHTSSREDCNAWMSLIRDAVNSCPVMEEQ
LSNEQEEARLARLRDFQERLYVKDSQIVQSLTEKLQMFADMAEAVTGREDVAAHSCLLLR
GDASDLQQGETLLKGAITEVENLQNLLLSGVTVRDPHPHPEDSLGPGRFSLRPEVVRLYL
GGLGLGRLGNLSVHRRAETFGGYDCNPPTPIKNVEGRPQRSNSDPQLQNLDQSESLELSF
FCAVLTLSHRLYGLQAIVSQQDSHIELQRASLLERERPGRNRGNMLLEQEKQRNLEKQRE
EVANFHKLQTQHRQNQARWEKERERHRLQAEVLEAELRQREEECRRLEKKLETEREELER
QRETYQQDLERLRESMRTVEKQKEHLNTQMKLKQNKTVTNPGSFNFKAQQAPLSQSFRGD
PPLLSQSFRGDPPLLSQSFRGDPPLLSQSFRGDPPLLSQSFRGDPPLLSQSFRGDLPLSQ
SFRVDPPLLSQSFRGDPSLSQSFRGDPPLLSQSFRGDLTADWMKGREVIQIPKVLVPPSL
SVATNIFLEQPPKVPPRRESISPGPPKPEFPIHLISTTNQVVHKPGAVQQQIPTKLAVLG
NKGKEKSSKKRSHHKRNHSAASIEMSQVVPIRVTGNQSLRGKKTVSPQRNYQLDDFFSPP
EPLSSAKPSHTLSSSSSMRTNNQSHVPPPKPPPPPPPFPHDVACKPTKEHVIYL
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctggatgctgtcagaggactgtctccccggcctgctcctcctcctgaggac
tcggtgtccctctccacgtcctccacagacaccatcaacttggaagatggccactactct
gccctacgagcggagctggaggctgatgctcaggacttggagggagagtcctggagtgtt
gctgtggaccagcagcacataaacagcctccaccaagacgcggtaaagaggcaagatgtc
atctacgagttgatccagacagaggtgcatcatgtgcggaccctgaagctgctgctgagt
gtttaccagtatgagctgagacacagcctacatatggaggatactaggcttgagaggatg
ttccctcagatcgacagcctgctgcacatccaccaacacttcctgtggtgtctcagggac
ggccgggacagacacaaccaccacactgtcacacagctgggagatatactcatcaaccag
ttttcaggtgagatgggggagaggatgaaggagagttacggcgtgttctgtagtcaccac
gctgacgctgtcagtctctacaaggaacagctacagaacaacaaaaagttccagaacttg
attatgaaaatcggtcggttgtccatcgttcggaggttaggagtaccagaatgcatcctg
ttggtgactcagcggatcacaaagtaccccgtcctggtggaacgcattctacagaacact
gaagccgacagtgaggagcacggtgccctgatccaggccctggttctgatcaaagagacc
atctctgctgtggactcccaggtccatgactatgagagggcctccaggctgagagacata
ggcggcaggctggagcctcgttcccatggccggtggaaggacggcagggtgttcacgaga
gaggatctggctgagggcctcagaaccctgctccacgaggggacggtcagctgtcgggtg
gcaaacggacggctcaaagacatccacgctgttctgttgtcagatgtcctgctgctctta
caaaaagaaaaggatcagaaactcatatttgctaatgtggacaacaagacgtcggtgatc
tccctccagatgctgatcgtcagggagatggcccatgaggacaaggctatgttcctgatc
agtgcttcgtccagcatgccagagatgtacgagatacacacctcctccagagaggactgc
aacgcctggatgagccttatacgagacgctgtcaacagttgtccagtaatggaggagcag
ctgagcaatgagcaggaggaggccaggctagccaggctcagagacttccaagagcgtctg
tatgtgaaggattcccagatcgtgcagagcctgacagagaagctgcagatgtttgctgac
atggcggaggctgtaacagggagggaggatgtagctgcccactcctgtctgctgctccgc
ggtgacgcctcagacctccagcagggggagacactgctcaagggggccatcactgaggtg
gagaatctgcagaaccttctcctgtctggtgtgactgtgcgagatccccacccccatcca
gaggacagcctgggaccagggaggttcagtttgaggccagaagtggtacggctttatcta
ggggggctaggccttgggcggctggggaacctgtcggtgcataggagagctgagaccttt
ggaggttacgactgcaaccctcccacccccatcaagaatgtggagggacgacctcaacgt
tcaaactctgacccccagctacagaaccttgaccaatcagagagcctggaactgtcgttc
ttttgcgccgtgctgacgctctcacatagactctacggtctgcaggccatcgtctcgcag
caggacagccacattgagctccagcgtgcctctcttttggagcgtgagcgtccgggtcgc
aaccgaggcaacatgctcctggagcaggagaaacaacgtaacctggagaaacagagagaa
gaggtggccaacttccacaagctgcagacacagcaccgtcaaaaccaggctcgctgggag
aaggagcgggagcgtcaccggctgcaggcggaggtcctagaggcggagctaagacagaga
gaggaggagtgtaggagactggagaagaaactagagacggagagagaggagctggagaga
cagagagagacataccaacaggatctggagaggctgagggagtcaatgaggacggtggaa
aaacagaaggaacacctcaatacacagatgaagttgaagcagaacaagaccgtcaccaac
cctgggagttttaacttcaaagctcagcaggctcccctctcccagtccttccgaggggat
cctcccctcctctcccagtccttccgaggggatcctcccctcctctcccagtccttccga
ggggatcctcccctcctctcccagtccttccgaggggatcctcccctcctctcccagtcc
ttccgaggggatcctcccctcctctcccagtccttccgaggggatcttcccctctcccag
tccttccgagtggatcctcccctcctctcccaatccttccgaggggatccttccctctcc
cagtccttccgaggcgatcctcccctcctctcccagtccttccgaggggacctgacagct
gattggatgaagggaagagaggtgatccagatccccaaggtccttgtcccccccagtctc
tctgtagccaccaacattttcctggaacagcccccgaaggtgccccctcgcagggagagc
atcagccccgggccccctaaaccggagttccccatccacctgatcagcacaaccaaccag
gtggttcacaaaccaggggccgtgcaacagcagatacccaccaagctggctgtccttggt
aacaagggcaaggagaagagcagtaagaagaggtcccaccacaagcgcaatcacagcgca
gcgtccatagaaatgtctcaggtggtgccgatcagagtgacaggaaatcagagtctgaga
gggaagaagactgtgagcccacagagaaactaccaattagatgatttcttcagtcctcca
gagcccctgtccagtgctaagccctcccatactctgtcgtccagcagcagcatgaggacc
aataaccagagccacgtccctccacccaaacctccacctccccctccacccttcccccat
gacgtagcatgcaaaccaaccaaggaacacgttatctacctgtaa
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