Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139389397
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Entry
139389397 CDS
T10872
Name
(RefSeq) AP-1 complex subunit beta-1 isoform X1
KO
K12392
AP-1 complex subunit beta-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139389397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139389397
Membrane trafficking [BR:
ocla04131
]
Endosome - Golgi transport
Others
AP-1 complex
139389397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
Alpha_adaptinC2
HEAT
PDS5
Cnd3
HEAT_GCN1
Arm
RTP1_C1
HEAT_EZ
XMAP215_CLASP_TOG
NELF-A_N
Arm_2
API5
FANCI_S3
Transposase_22
Motif
Other DBs
NCBI-GeneID:
139389397
NCBI-ProteinID:
XP_070992220
LinkDB
All DBs
Position
30:complement(20957812..21004118)
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AA seq
1022 aa
AA seq
DB search
MEWANQLCENRQFGSKMTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVG
KDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDANPLIRA
LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDT
LKDLISDSNPMVVANAVAALSEIAESHPNSNLLDLNPQSINKLLTALNECTEWGQIFILD
CLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYSTLLKKL
APPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIR
LASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVN
YVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADE
LLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGY
IYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPTLLEELICHIGTLASVYHKPPSAFVEG
SRGVMHKRLPARTGSGESTESPDVGAAGGSAPEAAPSIIPSQGDLLGDLLNLDMAPPTTS
GPPPPSTGMQMGGMDLLGGGLDSLMGDESEPPHVPPRTNTPRSPSPQPPSPVYTHTDYTY
TDYSHTDSPPDHSPTEHSPPAELGGDIGGSPAMGAGFGAAPAVMPASLNAPVGGGLGDLF
DLGGVGMPMGAYIPPKIVWLPAMKAKGLEISGTFARRAGVIQMELILTNKAMSVMTDFAI
QFNRNSFGLAPAGPLQVLTPLGPNQTIEVSLPLSTVGPVMKMDPLNNLQVAVKNNIDVFY
FSCQYPISMLFVEDGKMERQVFLATWKDIPNDNESQFQIKDCHLNSDAASSKLQGSNIFT
IAKRTVEGQDMLYMSIKLSNGIWVLAELRVQAGNPNYTISLKCRAPEVSQCVFQCYEAVL
KN
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggctaatcaattatgcgagaaccggcaatttggatccaagatgacggactct
aagtatttcaccactaccaagaaaggagagatctttgagctgaaagctgagctgaacagc
gataagaaggagaagaagaaggaggctgtgaaaaaggtcattgcctccatgaccgttggg
aaggatgtcagtgccctgtttccagacgtggtgaactgcatgcagactgacaacctggag
ctgaagaagctggtctacctgtacctgatgaactatgccaagagccagcctgacatggcc
atcatggctgtcaacaccttcgtcaaggactgtgaggacgctaaccccctgatccgggcc
ctggctgtgcgtactatgggctgcatccgcgtggacaagatcactgagtacctgtgtgag
cctctgaggaagtgtttgaaggacgaggacccctacgtgaggaagactgcagccgtgtgc
gtggccaagctccatgacataaacgcccagctggtggaggaccagggcttcctggatacc
ctcaaggacctcatctctgactccaaccccatggtggtagcgaatgccgtggcagccctg
tctgagattgcagagtcccaccccaacagcaacctgctggacctgaacccccaatccatc
aacaaactgctgacggccctcaacgagtgcacagagtggggtcagatcttcatcctggac
tgcctggccaactacaccccccgtgacgaccgcgagtcccagagtatctgtgagcgggtg
accccccgtctgtcccatgccaactctgcggtggtgctgtcggcagtcaaggtgctgatg
aagttcatggagatgcttcctaaggacctggactactatagcaccctgctgaagaagctg
gccccgcccctggtcaccctgctgtctgcagagcctgagctgcagtacgtggccctgagg
aacatcaacctcatcgtacagaaacgcccagagatcctgaagcatgagatgaaggtgttc
tttgtgaagtacaacgaccccatctatgtcaagctggagaaactggacatcatgatccgc
ctggcgtctcaagccaacatcgcccaggtgctggcagagctgaaggagtatgccactgag
gtggatgtggactttgtgcggaaggcagtccgagccatcggacgctgtgccatcaaagtg
gagcaatcagcggagcgctgtgtgagcaccctgctggacctaatccagaccaaggtcaac
tatgtggtgcaggaggccatcgtggtcatcaaggacattttccgcaagtaccccaacaag
tatgagagtgtgatcgccacgctgtgtgagaacctggactctctggatgagccggaggcg
cgggcggccatgatctggatcgtaggagagtacgcagagaggattgacaacgctgatgag
ctgctggagagcttcctggagggcttccacgacgagagcacccaggtgcagctgcagctg
ctgacagccatagtgaagctgttcctcaagaaacccactgagacccaggagctggtgcag
caggtgctcagcctggccacacaggactctgacaacccggacctgcgcgaccgtggctac
atctactggcgcctgctctccactgaccccgtggctgccaaggaggtggtactggctgag
aagcccctgatctcagaggagactgacctgattgagcccaccctgctggaggagctcatc
tgccacatcggcacgctggcttccgtctaccataaaccccccagcgccttcgtggagggc
agccgcggtgtgatgcacaagaggctccccgcccgcactgggtcaggagagagtacggag
agcccagacgtgggcgctgctgggggctctgcccctgaggctgctccctctatcatcccc
tcccagggagacctcttgggcgaccttctcaacctggacatggcaccccccaccaccagt
ggccccccacccccctccaccggcatgcagatggggggcatggacctcctaggtggaggt
ctggacagcctgatgggggatgagtctgaaccgccccacgttcccccgcggacgaacact
cctcgctctccgtcacctcagcccccgtcgccagtgtacacccacactgactacacctac
actgactacagtcacactgacagccctcctgaccacagccctactgagcacagcccccct
gcagagcttggaggagatattggtggcagtcctgcgatgggggcaggttttggggcggct
cctgctgtgatgccagcctcgctcaacgccccagtggggggtggcctaggagacctgttt
gacctgggtggggttggaatgccgatgggagcatatattcctcccaaaatagtgtggctc
ccggccatgaaggctaaaggtctggagatttctgggaccttcgctcggcgtgctggagtc
atccagatggagctgatcctcaccaacaaggccatgagcgtcatgaccgactttgccatc
cagttcaacaggaacagttttggactggcccctgccggccctctccaggtcctcacccct
ctcggcccaaaccagacaattgaagtcagcctccccctcagcactgtcgggccagtcatg
aagatggaccctctcaacaacctgcaggtggctgtgaagaacaacattgacgtcttctac
ttcagctgccaataccccatcagcatgctgtttgtggaagatggaaagatggagcgtcag
gtgttcctggccacatggaaagacattcctaatgacaacgagtctcagttccagatcaaa
gactgtcatctcaactcagatgcagccagcagcaagctgcagggcagtaacatcttcacc
atagccaagcgcacggtggagggccaggacatgctttacatgtccatcaaactgtccaat
ggcatctgggtgctggctgaactgagggtgcaggctggaaaccccaactacacgatctct
ctgaagtgcagagcaccagaggtgtcccagtgtgtgttccagtgctatgaggcagtgctg
aagaactga
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