Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139390143
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Entry
139390143 CDS
T10872
Name
(RefSeq) DNA polymerase delta subunit 2
KO
K02328
DNA polymerase delta subunit 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03030
DNA replication
ocla03410
Base excision repair
ocla03420
Nucleotide excision repair
ocla03430
Mismatch repair
ocla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139390143
03410 Base excision repair
139390143
03420 Nucleotide excision repair
139390143
03430 Mismatch repair
139390143
03440 Homologous recombination
139390143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocla03032
]
139390143
03400 DNA repair and recombination proteins [BR:
ocla03400
]
139390143
DNA replication proteins [BR:
ocla03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
139390143
DNA repair and recombination proteins [BR:
ocla03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
139390143
MMR (mismatch excision repair)
DNA polymerase delta complex
139390143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
139390143
NCBI-ProteinID:
XP_070993443
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All DBs
Position
30:30954537..30971258
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AA seq
474 aa
AA seq
DB search
MFSEVSAPQEGSCSLLLCRPGSEDQEPSVFDRVKPAYSPCSERFKLGERSFNRQYAHIYA
TRLMQMSPLLTERAQQKWGADVRIRKLCDLQMGEQCCIVGTLFKHMELQPSILKEISEEH
NLLPQPPRTRYISESDELILEDELQRIKLEGNIDVDKFVTGSVIAIYGAEKNDGKFTVDD
FCTADLPPQAPRTTLSSDRFVLLLSGLGLGGSHADSMLALQLLVDMVTGHLGDQGEQSGA
STISRVLLAGNLLSQSTQDKDASTKAKYLTKKTQAGTVDAMRLLDEMLMQLVSSVPVDVM
PGQYDPTNYTLPQQPLHHCMFPLSSSYPTLQLASNPHQATLDGVRILGTSGQNVKDIQKY
SSMDSHLEILENTLRLRHLAPTAPDTLGCYPFYLKDPFILEECPHVYFSGNAPSYQAKRI
TGAEGQEVLLVAIPEFSSTQTACLVNLRTLECEPIRFSSFSAGDDEESEMNISH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttctctgaggtgagcgcccctcaggagggttcctgttctcttctgttgtgtcgtcct
ggctccgaggaccaggagccctccgtgtttgacagggtcaagccggcatactcaccctgc
tctgagcgtttcaagctgggggagcgcagcttcaaccgccagtatgcgcacatttacgcc
acacgactcatgcagatgagccccctgctcacggagagggcccagcagaaatggggtgca
gatgtacggatcaggaagttgtgtgatctgcagatgggtgagcagtgttgcattgtggga
accctgttcaagcacatggaactgcagccatccattctgaaggaaatcagtgaggaacac
aatctgctgccccagcctccgcgcacgaggtacatcagcgaatcagatgagttgatactg
gaggacgagctgcagaggatcaaattagagggcaatattgatgtggacaagtttgtcaca
ggtagtgttattgctatttatggtgcagaaaagaatgatgggaaattcacagtggatgat
ttctgtactgctgacctccccccgcaggcccccagaaccactctcagctcagacaggttt
gtgctgctgttgtcaggtttgggtctgggcggtagtcatgcagatagtatgctggcttta
cagctgcttgttgacatggtaacgggtcacctaggtgaccagggggagcagagtggtgca
tcgacaatctccagggttctactggccgggaaccttctgagccaaagcacacaggacaag
gacgcatccaccaaggctaaatacttgactaagaaaacccaggcaggcactgtggatgcc
atgcgtctgctggatgagatgctgatgcagctggtgtcgtcagttccagtggatgtgatg
ccgggccagtatgatcctactaactataccctgccccagcagcccctacaccactgtatg
ttccccctctcctcctcctaccccaccctgcagctggcctccaacccacaccaggccacc
ctggatggggtgaggatcctggggacgtcagggcagaatgtgaaagacatccagaagtac
agcagcatggacagtcacctggagatactggagaatacactgaggcttagacacctcgcc
cctactgcacctgacacactagggtgttatccattctacctgaaggaccctttcatcctg
gaggaatgtcctcatgtctacttcagcggcaacgccccctcctaccaggccaaacgcatc
accggtgctgaaggtcaggaagtcctcctggtggctattccagagttcagcagcactcag
acagcctgcctggtcaacctccggactctggagtgtgagccaatccgcttctcttccttc
tctgctggtgatgatgaggagagtgagatgaacatcagccactga
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