Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139391354
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Entry
139391354 CDS
T10872
Name
(RefSeq) gigaxonin-like
KO
K10453
kelch-like protein 16 (gigaxonin)
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocla04121
]
139391354
Ubiquitin system [BR:
ocla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
139391354
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_1
BACK
Kelch_FKB95
Kelch_KLHDC2_KLHL20_DRC7
BTB
Beta-prop_Calicin
Beta-prop_ATRN-LZTR1
Kelch_2
Beta-prop_FBX42
NANM
DUF6242_C
DUF1668
BTB_3
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
139391354
NCBI-ProteinID:
XP_070995030
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Position
1:complement(23916143..23940880)
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AA seq
608 aa
AA seq
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MSTSDPVVSAAGSVVSDPQHSQKLLKALRSFWIEQCFQDAVLVLEGEKIPVQKNILAAAS
PYIRTKLNYNPPKEDGSMYTIELQGISVTIMKQILDYIFSGEISLSEDTIQDMVQAADLL
LLTDLKSLCCQFLESCIAAENCIGIRLFSLHYCLHHVHHAATDFLQTHFCDVAVTEEFRE
LPPDRLCEILSMDKLNVGNEKHVLEAVVRWLGHDLEERRVHMKEVMSSVWIQGLDQGYLR
EQMLGEPLMREVIREYCNAPLGGATLQGEALLAAFKPRGYSECIVTVGGEERVTRKPSAM
IRCMCPLYDPNRQLWIELEPMSIGRIGHGVLAAEGHLFVMGGMDETKTVLSSGEKYDPNT
NTWTPIPSMKQARQNFGVAELDGMIYVLGGEEEDMELLTVEVFDPHYNTWTTQTSMTMVR
KVGCYATMKKKIYAMGGGSYGKLYDSVESYDPKTQQWTAICPLKERRFGSVACGVGQELY
VFGGVRSRDSDNPESSTMTTCKSEFFHDEMKRWIYLDDQNLCVQTSSSFVYGAVPIGVSI
YVVGDLDTGTTYDYVREFRRSSGTWHRTKPMLTSDLCKTGCAALRIANCKLFRLQLKQGL
FRHRVPSS
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctctgatccagtggttagcgctgcaggttcggtggtatcggaccctcaacac
tctcagaaacttctcaaggcccttcgctcattctggatagaacaatgcttccaagacgca
gtgttagtactggaaggggaaaagattccagtccagaaaaacattttggctgcggctagt
ccatatatcagaacaaagctgaactacaaccctccaaaggaagatggatccatgtacacc
attgagcttcagggaatctctgtcactatcatgaagcagatcttggactacatctttagt
ggggagatcagtctgagtgaggacaccattcaggacatggtccaggccgctgacctgctg
ctcttgacagacctgaagtccctgtgctgccagttcctggagagctgcattgctgcagag
aactgcattgggatccggcttttctctctacattactgccttcaccatgttcaccatgct
gccacagacttccttcagacacatttctgtgatgtggccgtcacagaggagtttagggag
ttacctccagaccggctgtgcgagatcctgtcgatggacaagctcaacgtgggcaatgag
aaacatgtcctggaggctgtggtgcgctggcttggccatgacctggaggaacggagggtg
cacatgaaagaggtgatgtcatcggtgtggatccaggggctggaccagggttacctgagg
gagcagatgttaggagagcccttgatgagggaggtgatccgggagtactgcaacgctcca
ctggggggcgcaacactgcagggcgaggctcttttagccgccttcaaacctcgtggctac
tcggagtgcattgtcactgtagggggggaggagagagtaacgaggaagccgtcagccatg
atacgctgcatgtgtccactctatgacccaaaccgccagctgtggatcgagctggaacca
atgagcattgggcgaatagggcatggggtgctggcagcagagggccatctctttgtgatg
ggtggcatggatgaaaccaagacagtcctgagcagtggagagaaatatgacccaaacaca
aacacttggacccccattccttccatgaaacaggcgaggcagaactttggtgttgctgag
ctggatgggatgatctatgtgttgggaggagaggaagaggacatggagctcctgactgtg
gaggtgttcgaccctcactacaacacctggacaacccaaaccagcatgaccatggtccgc
aaggttggctgctatgccaccatgaaaaagaagatctatgccatgggtggtgggtcatat
ggaaagctgtacgactcagtagaatcttatgatccaaagacccagcagtggactgcaatc
tgccctttgaaagagagaaggtttggctcagtggcgtgtggtgtgggtcaggagctctat
gtgtttggaggcgtgaggagccgtgactcagacaacccagaatccagcaccatgaccacc
tgcaagtccgagtttttccatgatgagatgaaaagatggatatacctggacgaccagaat
ctctgtgttcagaccagttcctcctttgtgtatggagctgtccccattggagtcagcatt
tatgtggtgggagacctagacactggtacaacctatgactatgtgagggaattccgtcgt
agctcggggacgtggcaccgcaccaagcccatgctgacatctgatctgtgcaagacgggc
tgtgcagccctgcgcatcgctaactgcaaactgttccgtctgcagctgaagcagggcctg
tttagacacagggtcccatcgtcatag
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