Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392538
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Entry
139392538 CDS
T10872
Name
(RefSeq) septin-5-like
KO
K16943
septin 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
139392538
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139392538
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ocla03037
]
139392538
04812 Cytoskeleton proteins [BR:
ocla04812
]
139392538
Membrane trafficking [BR:
ocla04131
]
Exocytosis
Calcium ion-dependent exocytosis
Septins
139392538
Cilium and associated proteins [BR:
ocla03037
]
Motile cilia and associated proteins
Sperm associated proteins
139392538
Cytoskeleton proteins [BR:
ocla04812
]
Eukaryotic cytoskeleton proteins
Septins
Septins
Group 2
139392538
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Septin
MMR_HSR1
GTP_EFTU
Ras
RsgA_GTPase
Roc
nSTAND1
VapE-like_dom
AIG1
AAA_24
AAA_16
ABC_tran
FtsK_SpoIIIE
AAA_22
AAA_29
AAA_7
NACHT
Motif
Other DBs
NCBI-GeneID:
139392538
NCBI-ProteinID:
XP_070996683
LinkDB
All DBs
Position
33:complement(3850218..3882708)
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AA seq
442 aa
AA seq
DB search
MDPQILKVLQLHHREHPERLYNQPPGTATAGYLAIRHYRASATIPALPSDGEFSSLAKDE
LGNLNLESFIREFPQNRYNCSSHQGTGLISGNFCYSSPLPEHHYPATPTSWTSDRPPRPK
SPWGCLDPYTSEDQDREYVGFATLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLVNSLFL
TDLYKDRKVLNAEERLAQTVGITKNTVCIEEKGVKLKLNIVDTQGYGDTINNTDSYKCVS
DYIDHQFEQYRRDEIGLNRKNIQDNRVHCCLYFISPFGHGLRPLDVECMRALQDKVNIIP
VVAKSDGLTYDEVKKKKSRILSEIDKYRLKIYQFPDCDSDEDEEFRRQDMELKRSVPFAV
IGSNMVVDVNGRRIRARLYPWGVVEVENQYHSDFVHLRNMLVRTHMQDLKDMTHDTHYES
YRAQWLCKSQRTDVDYDFCHTI
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggatccccagatcctcaaagttctacagctgcaccatcgagagcatcctgagaggttg
tataaccaaccgcctggtacggcaactgctgggtatctggccataaggcactacagagcc
tctgccaccatacctgcactgccttcagatggagagttctccagcctggctaaagatgaa
ttggggaacttaaatctggagagtttcatcagggagtttccccagaacagatacaactgt
tcctctcaccagggcacaggattgatctcaggaaacttctgttactcctcccctctcccg
gaacaccactacccggccacacccaccagctggacctctgaccgccccccacgacccaag
agcccctggggctgcctagacccctacacctctgaggaccaggacagggagtatgtaggc
tttgctactctgcccaaccaggtacacaggaagtcagtaaagaagggatttgagttcact
ctgatggtggtaggagagtctggtctgggtaaatctacactagtcaacagtctgttcctt
acagacctctacaaggacaggaaggtgctgaatgcagaggagaggctggctcagactgtg
ggcatcactaagaacacagtgtgcattgaggagaagggagtgaagctcaaactcaacata
gtggacacacaaggctatggagataccatcaataatacagacagctataagtgtgtttca
gactacattgaccatcagtttgagcagtaccgcagggatgaaatcggcctgaacagaaag
aacatccaggataacagagtccactgctgcctctacttcatctctcccttcggacatggt
ctgcggccattggatgtagagtgtatgagggctctgcaggacaaggtcaacatcatccct
gttgtggccaaatctgatggtctcacttatgatgaggttaagaagaagaagagcaggatc
ctaagtgagatagataagtacaggttaaagatctaccagttcccagactgtgactctgat
gaggacgaggagttcaggaggcaggacatggagctcaagaggagtgttccgtttgcagtg
atcggcagtaacatggtggtggatgttaatggtcgacggatccgcgcccgtctctacccc
tggggagtggtggaagtggagaaccaatatcacagtgactttgtccacctgaggaacatg
ttggtgaggactcatatgcaggacctgaaggacatgacccatgacacacactatgagagt
tacagagcacagtggctgtgcaagagccaacgcactgatgtggattatgacttctgccac
acaatctaa
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