Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139392736
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Entry
139392736 CDS
T10872
Name
(RefSeq) ataxin-7-like protein 1 isoform X1
KO
K11318
ataxin-7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocla03021
]
139392736
03036 Chromosome and associated proteins [BR:
ocla03036
]
139392736
Transcription machinery [BR:
ocla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
139392736
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139392736
SAGA complex
139392736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCA7
OrsD
DUF2462
Motif
Other DBs
NCBI-GeneID:
139392736
NCBI-ProteinID:
XP_070997049
LinkDB
All DBs
Position
33:11491392..11523388
Genome browser
AA seq
747 aa
AA seq
DB search
MATLDRQLPNPDTFLCKPWSTFISAAKLHYSDNSLVGNRLKELYNSWEGTKLSKEEMHVF
GQFPNQEDFCLVVCNVCNQVVKPQGILTHYERRHGSPCPSRGPVASVKPNVAVSPTPGPT
PPLPFRVPRDYPHSRFNKAPLAVYPPKGVRSKTCVSLPVVSLEKMPCLGRAESGTHVRVH
CFSSSPSCSSPSSLKPSLTPPAPLRGSQEMLVNGRGPTAPCSSTPPSVDPRPSPARSPVD
KRPTSLSPLDHRRPSASHSPSPRTPATPSPLDRKQQNGTKTPRPHRRLSGRVFDPNKHCG
VQDPESKRSCTRSLTCKTHSLIHRRAVPGRQKEFDILLAEHKGRAKEKEKEGGQRRESKG
GSQSSPANDTTPSTLPPHCHNGRTVSTLKLRLANAHIPRVPGGGGAAVLSSTPVPPASTQ
DPPAPVWQRAGEDRDGHLSSYEGDPGTPEDPDRDIDGDRPSCHYSPHHPRPLGCCAFNSR
LMGRGHYVFDRRWDRMRLALHCMVEKHVNAQMWRKVPLAAESPPSPSSLTPPPPLSSPSF
PPSTNGAFSLGSYSTAFPQNASAAGLFGIRDPSLAPVSALGKPRNGTSTKPIRPPGATGV
AAKKRRTTLPSSFDTLRGNNSSYHTLTPTPMLSSGLPPLSGRRKTLGNSASEVGVRAEDW
YSNPDPTTTTPYPLTTDHPSPLPPPSPLAHGGGVDGRKRRSPSAYGGGGKPSKVTKAAAG
LDGIFRRNSTGLLASGPESPRQSKLHH
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattggatcgccaactaccaaatccggatacgttcctgtgcaaaccttggtcg
acttttatcagcgcagcaaaattacactattctgacaactcgctcgtcggaaaccgcttg
aaagagctgtacaactcctgggaaggaactaaactcagcaaagaagagatgcacgtgttt
ggccagtttcccaaccaggaggatttctgtctcgtcgtctgcaatgtctgcaaccaagtg
gtcaaaccccaggggatcctcacccactacgagcgccggcacggctccccatgtccctcc
aggggtccagtggcctctgtgaagcccaatgttgcagtgtcccccaccccgggtcctact
ccccctctgcccttcagggtccccagagactacccccactcccgcttcaacaaggccccg
ctcgctgtctaccctcccaagggtgtccgcagcaagacatgtgtgtcgttgccagtagtg
agtctggagaagatgccatgtctgggccgggcagagagcggaacacatgtcagagtccac
tgcttttcttcctccccctcctgttcctctccctcctccctcaaaccctccctgaccccc
ccagctccccttagggggtctcaggaaatgctggtgaacggtcgtggccccaccgcccct
tgctcctccacgcccccctcggtggacccccggcccagcccggcccgctctcccgtggat
aaacggcccactagcctctcccccctggaccaccgcagaccctccgcctcccactccccc
tcccctcggacccctgcaaccccttcccccctggacaggaaacagcagaatggaaccaag
acccccaggcctcacaggagactgtcaggaagggtgtttgacccgaacaagcactgtgga
gtccaggacccggagagcaaacggtcctgcacgcgatcactcacctgcaagactcactcc
ctgatccaccggcgggccgtcccaggcaggcagaaagagtttgatatcctcctggcagaa
cacaagggcagagcgaaggagaaagagaaggagggagggcagaggagggagtcaaagggg
ggcagtcagagcagccctgccaatgacactaccccctccaccctgcccccccactgccac
aatggcagaaccgtctccactctcaaactgcggctggctaatgcacacatacccagggta
ccaggtggtgggggcgctgctgtcctatcctccacccccgtccctccagcctcgacccag
gaccccccagcccctgtctggcagagggcaggagaggacagggacggtcatttgtccagt
tatgagggcgacccaggaacaccggaggaccctgacagagacatagacggagaccgacca
tcctgccactactcccctcaccaccctcgaccactggggtgctgtgcgttcaacagcagg
ctgatggggcgtggtcactatgtgtttgaccggcggtgggacaggatgaggctggcgtta
cactgcatggtggagaaacatgtcaacgctcagatgtggagaaaggtgcccctggctgct
gagagccctccctcccccagctctctcacccctcctccccccctttcctccccctccttc
cctccctccaccaacggagccttctcccttggatcctactccacagccttcccccagaat
gcatcagcagcagggttgtttggcatcagggacccctccctggcccctgtctccgcccta
gggaaaccacgtaacggcacttccaccaaacccatcaggcccccaggggccactggtgtc
gcggccaagaagaggaggaccacccttccatctagttttgacactctcagggggaacaac
agcagctaccacactctgactcccacccccatgctcagctctggcttgcccccccttagt
ggtaggagaaagaccttaggaaacagtgccagtgaggtgggggtcagggccgaggactgg
tactccaaccctgacccaaccaccaccacaccctaccccctcactacggaccaccccagc
cccctgcctccacccagccccctggcccacggaggaggggtggatgggagaaagaggagg
agccccagtgcgtacggaggaggagggaagcccagtaaggtgaccaaagcagcagcaggg
ctggacggcatcttcaggaggaacagcactggacttctggcctcaggccccgagtcacct
cgacagtccaagttgcatcattga
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