Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139398526
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Entry
139398526 CDS
T10872
Name
(RefSeq) sorting nexin-18-like
KO
K17923
sorting nexin-9/18/33
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
139398526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ocla04131
]
139398526
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
139398526
Membrane trafficking [BR:
ocla04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
139398526
Macropinocytosis
Sorting nexins
139398526
Domain-containing proteins not elsewhere classified [BR:
ocla04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
139398526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
SH3_2
SH3_9
SH3_1
XFP
Spore-coat_CotD
Motif
Other DBs
NCBI-GeneID:
139398526
NCBI-ProteinID:
XP_071000575
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MALKARALYEFNSENTGEISLTEHEIVSLYSEQDIEGWLEGSNSKGERGLFPASYVEILN
NDTASTFNNNSTSEDTYRGSRYANIPTGGFGDASNKTLNQIENLSKTSIISSGFTASSPL
APAQQQQHGYQASQGSDEDWDEDWDDTSTVADEPGVVGGSHQGDFDGNGSSTYSVSTSSM
SRSGNAQQAKSSATVSRNLNRFSTFVKSGGEAFVLGEAAGFVKDGDKICVVTGQYGPEWQ
ENPYPFSCTIDDPTKQTKFKGMKSYIAYKLTPTHTQTQVNRRYKHFDWLYARLVEKFPVI
SVPHIPEKQATGRFEEDFISKRRKGLIWWMNHMTSHPVLSRCDVFQHFLSCN
NT seq
1058 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaaggcgagggctttatacgagttcaattccgaaaacacaggggagatatca
ttaacggaacatgaaatagtgagcttgtacagcgaacaggacattgaaggctggctagaa
ggatccaacagcaaaggcgagagaggtctcttccccgcgtcctacgtcgagatcctaaat
aacgataccgcgtccacgtttaataataacagcacatcagaggatacttaccggggatcc
cgatacgccaatattccaaccggaggtttcggggacgcctcgaataaaacattaaatcaa
attgaaaacttgtccaaaacatcaataatatcgtctgggtttacagcgtcctcgccactt
gccccagcgcagcagcagcagcacggttaccaagccagccagggcagcgatgaagactgg
gatgaagactgggatgacacctctacagtggctgacgagcccggggttgttggtggcagt
caccaaggggactttgatggcaatggatcgtctacatatagcgtgtcaacatcttctatg
tccagaagtggcaacgctcaacaagccaagagctctgccacggtcagtagaaacctcaat
aggttttcaacatttgtgaaatcaggaggggaagcgttcgtgttaggtgaggcagctggg
tttgtgaaagatggggataagatctgtgttgtaacgggacaatacggtccagaatggcag
gaaaacccatacccattctcctgtaccatagacgaccccaccaagcagaccaagttcaaa
gggatgaagagttacattgcctacaagctgacgcccacccacacacagacccaggtaaac
aggaggtataaacactttgactggctctacgccaggctggtggagaagttccctgtcatc
tcggtgccccacatcccagagaaacaggccacggggcggtttgaggaggacttcatctct
aaaaggaggaaagggttgatatggtggatgaatcacatgactagtcacccggtcctgtcc
agatgtgatgtgttccagcacttcctctcctgcaacag
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integrated database retrieval system
