Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402265
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Entry
139402265 CDS
T10872
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139402265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139402265
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
139402265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
DGOK
DUF7027
Motif
Other DBs
NCBI-GeneID:
139402265
NCBI-ProteinID:
XP_071002464
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVMIGAIGASTDWNQTAYGP
VPPKERDQADMILPIVLQYLCPPFVSFFGLGAVSAAVMSSADSSILSASSMFARNIYQLA
FRQSASDTEIVWVMRVTIFVFGGLATAMALLTGTVYGLWYLSSDLVYVIIFPQLISVLFV
KGTNTYGSVAAYVFGLILRIGGGEPYLSLPPFIYYPGWQIEDRIHHLTGEVEHIVVQKFP
FKTVSMLASFLGNVAFSYLAKYLFESGKLLPKYDFLDAVLAQHSIENMDKTTLVNRNTIV
LSEMAPVKPRLSVQLAATFTRRDTLAEEDSSPEDSPNHETLD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttgggggggattccctggcaggtatattttcaacgggttctctctgcctcttcagct
acgtacgcccaggtgctctcgttcatcgccgctgcagggtgcctggtcatggccgtgccc
tcagtaatgatcggggctataggggcctccacagactggaaccagacggcatatggacct
gtacctcccaaggagagggaccaggcagacatgatattacccatagtcctccagtacctc
tgtcctcccttcgtctccttcttcggcctgggggcggtctctgctgccgtgatgtcatct
gccgactcctccatcctgtcagctagctccatgttcgctcggaacatctaccagctggct
tttcgccaatcggcatcggacaccgagatcgtgtgggtgatgcgtgtcaccatctttgtg
ttcggcggcctggccacggcgatggcgttgctaacggggacggtgtacggactgtggtac
ctgagctccgacctggtctacgttatcatcttccctcagctcatctccgttctcttcgtc
aagggaaccaacacgtatggttccgttgctgcttacgtctttggtctgatcctgaggatc
ggaggaggggaaccttacctctcactaccccccttcatctactacccaggctggcagata
gaggaccggatccatcatctgaccggagaggtggaacacatcgtggtgcagaagttcccg
tttaagaccgtctccatgttggcctccttcctgggcaacgtggctttctcctacctggcc
aagtatctgtttgagagcggcaagttgttgcccaagtatgacttcctggacgcggtgttg
gcccagcacagcatagagaacatggacaagaccacgttggtcaaccgtaacaccatcgtg
ctgtctgagatggcgcctgtcaaaccacggctcagcgttcaactggcggctacgttcacc
cgcagagacactctggctgaggaggactcgagtcccgaagacagcccaaaccacgagacc
ctggactaa
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