Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139402443
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Entry
139402443 CDS
T10872
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
139402443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocla02000
]
139402443
Transporters [BR:
ocla02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
139402443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSF
DGOK
Motif
Other DBs
NCBI-GeneID:
139402443
NCBI-ProteinID:
XP_071002489
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MTGIHVEGLAAIALFYVLILAVGIWAAWKNKHAGEAEGTDRSETIMVGGRDIGLFVGGFT
MTATWVGGGYINGTAEYVYLPGYGLAWAQAPFGYALSLVVGGLFFAKPMRSRGYVTMLDP
FQQKYGKRMGGLLFIPALMGEIFWSAAILSALGATLSVIIDINIKMSVVISACIAIFYTL
VGGLYSVAYTDVVQLFCIFLGLWVSVPFALSNAAVSDIKISAVKEIYQAPWKGNIKREDA
WVWIDNFCLLMLGGIPWQVYFQRVLSASSATYAQVLSFIAAAGCLVMAVPSVMIGAIGAS
TDWNQTAYGPVPPKERDQADMILPIVLQYLCPPFVSFFGLGAVSAAVMSSADSSILSASS
MFARNIYQLAFRQSASDTEIVWVMRVTIFVFGGLATAMALLTGTVYGLWYLSSDLVYVII
FPQLISVLFVKGTNTYGSVAAYVFGLILRIGGGEPYLSLPPFIYYPGWQIEDRIHHLTGE
VEHIVVQKFPFKTVSMLASFLGNVAFSYLAKYLFESGKLLPKYDFLDAVLAQHSIENMDK
TTLVNRNTIVLSEMAPVKPRLSVQLAATFTRRDTLAEEDSSPEDSPNHETLD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtatccacgtggagggactggcggcgatcgccctcttctacgttctgatcctt
gcggtggggatctgggcagcgtggaagaacaaacacgccggggaggcggagggcacagac
cgcagtgaaaccatcatggttggtgggagggacattggtttatttgttggtggttttacc
atgaccgcgacctgggttggtggcggatacatcaacggaacggcggaatacgtctatctt
cctgggtacggcttggcttgggcacaagcgccttttggatatgcgctaagtctagtcgta
ggaggtctgttcttcgccaagcccatgcgctccagaggttatgtcaccatgctggaccct
ttccagcagaagtatgggaagaggatgggtggtctgctcttcatacctgctctaatggga
gagatcttctggtcggcggccattttatctgctctgggagccacgctgagtgtgatcata
gacataaacatcaagatgtctgtggtgatctcagcctgtattgcgatcttctacacgtta
gtcggaggtctgtattctgtagcctacaccgacgtggtgcaactcttctgtatcttcctg
ggactgtgggtttcagtaccgttcgctctgagcaacgcagcggtgtctgacatcaagatc
agtgcagtgaaggagatctaccaagctccctggaagggaaacatcaagagagaagacgcc
tgggtctggatagacaacttctgtctgctgatgttgggggggattccctggcaggtatat
tttcaacgggttctctctgcctcttcagctacgtacgcccaggtgctctcgttcattgcc
gctgcagggtgcctggtcatggccgtgccctcagtaatgatcggggctataggggcctcc
acagactggaaccagacggcatatggacctgtacctcccaaggagagggaccaggcagac
atgatattacccatagtcctccagtacctctgtcctcccttcgtctccttcttcggcctg
ggggcggtctctgctgccgtgatgtcatctgccgactcctccatcctgtcagctagctcc
atgttcgctcggaacatctaccagctggcttttcgccaatcggcatcggacaccgagatc
gtgtgggtgatgcgtgtcaccatctttgtgttcggcggcctggccacggcgatggcgttg
ctaacggggacggtgtacggactgtggtacctgagctccgacctggtctacgttatcatc
ttccctcagctcatctccgttctcttcgtcaagggaaccaacacgtatggttccgttgct
gcttacgtctttggtctgatcctgaggatcggaggaggggaaccttacctctcactaccc
cccttcatctactacccaggctggcagatagaggaccggatccatcatctgaccggagag
gtggaacacatcgtggtgcagaagttcccgtttaagaccgtctccatgttggcctccttc
ctgggcaacgtggctttctcctacctggccaagtatctgtttgagagcggcaagttgttg
cccaagtatgacttcctggacgcggtgttggcccagcacagcatagagaacatggacaag
accacgttggtcaaccgtaacaccatcgtgctgtctgagatggcgcctgtcaaaccacgg
ctcagcgttcaactggcggctacgttcacccgcagagacactctggctgaggaggactcg
agtcccgaagacagcccaaaccacgagaccctggactaa
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