Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139406557
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Entry
139406557 CDS
T10872
Name
(RefSeq) semaphorin-4E
KO
K06521
semaphorin 4
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ocla04090
]
139406557
CD molecules [BR:
ocla04090
]
Proteins
139406557
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GFIT
Motif
Pfam:
Sema
PSI
Ig_3
ig
I-set
Ig_2
V-set_CD47
Sema4F_C
Motif
Other DBs
NCBI-GeneID:
139406557
NCBI-ProteinID:
XP_071005366
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Position
4:complement(19695970..19721068)
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AA seq
803 aa
AA seq
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MSPLSALGVFCGLFLSMCLGEYNTHSCIPRKSVLYQDNLKLFREEGIWNYSTMLVREDLG
LLLLGAREAVYALDINDISIKKSGVYWRVTEEKQRECTYKGKHAEIECRNYIRTLHKVDD
STMYVCGTNAFSPTCDYMTYSEGQLRLEEAQEEGKGKCPFDPFQKYSSIMVGNDLYSATS
INFLGSEPVVLRSSSSALRTEFKSSWLNEPNFVYMDLVPESNNNPEGDDDKVYLFFSENA
MEYDFYNKLTVSRVARVCKGDMGGQRTLQRKWTSFLKARLDCSLPEPSLPYIVQDVFLLK
NDDWRKSVFYAVFTPQSSSSDMSAVCAYSVSAIRDVFDKGKFKTPVTVETSHVKWVMYSG
EVPTPRPGACINNAARTLGMERSLDLPDKTLQFIRDRPLMDDAVHPLTGRPLLVKRGDLF
TRLVVDSVLALDGERYAVMFIGTENGYVQKAVNYAGEMFIIEEIQLYQTPEAIRTLRLSS
TGQLYAGSEYGAVQMPLSECGRYESCLDCVLARDPYCGWDLSTGLCSSAVASSPFASVPT
NMIQSLKDGDISQCPKSETMKPENYTLVPGNNIKLPCQPDSNLAQVQWLFSGQLLLSDTK
YYIYNGGILILNASAANTGQYTCESVEQVNSRPYTRTMAVYQLLPHTNLEEESETMTESP
HSHSTPLPELLEVTEKPKALDPLPPPESQCEDGRVVGLQVVVALLSLMLVGLVAWSLYKG
CFRNRFSENSSAGQVKRPSDDYMQIQNNITSEFKLLGPTPSHSANKNQNAIIAFKGNGEH
HFSPGSNISTVDGLGYIDDESEI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctctctgccctgggtgttttctgtggattgttcctttctatgtgtctcggt
gaatacaacactcacagttgtatcccacggaagagtgtcctctaccaggacaatctgaaa
ctgttccgagaggaagggatttggaactactccactatgttggttcgagaggatctgggc
ctgctgctgctcggggctcgagaggctgtctatgccctggacatcaatgatatctccatc
aagaagtctggggtgtattggcgggtcactgaggagaaacagagggagtgcacatacaaa
gggaaacacgctgaaatcgaatgccgtaactacatccggaccctgcataaagtggatgac
agcacaatgtatgtgtgcgggacaaatgctttcagccccacctgtgattacatgacgtac
tctgaaggacagctgagactagaagaagcgcaggaggagggaaaagggaaatgccccttt
gatcccttccagaaatactcctccatcatggtcgggaatgacctctactctgctacctcc
atcaacttcctgggctctgagcctgtggttctccgcagctcctcctctgcgcttcgcact
gagttcaagagctcctggctcaacgagcccaactttgtatacatggaccttgtccccgag
agcaataacaacccagagggggatgatgataaggtctacctgttcttcagcgagaacgcc
atggagtatgacttctacaacaagctcaccgtgtcaagagttgctcgtgtctgcaagggg
gatatgggtgggcagcggacgctccagaggaagtggacgtcattcctgaaggctcgcctg
gactgctctctgccagagcccagcctgccatatattgtacaggatgtcttcctgctcaaa
aacgatgactggcgcaaaagtgttttctacgcagtcttcactccccagtcgagctcgtcc
gacatgtctgcagtgtgtgcgtacagtgtgtcggccatcagagacgtgtttgataagggg
aagtttaagacgccagtgactgtggagacttcccatgtgaagtgggtcatgtacagtgga
gaggtgcccaccccaagacctggagcttgcattaacaacgcagcacggacccttgggatg
gagcgctccctggacctgccagacaagaccctgcagttcatcagggaccggcccctcatg
gacgatgccgtgcacccgctgaccggccgtccgctgctggtcaaaaggggagacctgttc
acacgcctggtggtggacagcgtgctagctctggatggggagagatacgcagtcatgttc
atcggcacagagaacggctatgtgcagaaggcagtgaactacgctggagagatgttcatc
attgaagagatacaactgtaccagaccccagaggctatcaggaccctgcgtctctccagc
acgggtcagctgtatgcaggctctgagtatggagctgtgcagatgcctctgagtgaatgt
ggccgttatgagtcttgtctggactgtgtcttagccagagacccttactgtggctgggac
ctctccactggcctctgctcctctgctgtggccagctcaccctttgcctcagtccccacg
aacatgattcaaagtctaaaagatggtgacatctcacaatgtccgaaatcagagacgatg
aagccagagaactacaccttagttcctggcaacaacatcaagctgccgtgccagcctgac
tccaacctggcacaggtacagtggctcttctcagggcaactgctgctgtctgataccaag
tactacatctacaatgggggtatcctcatcctcaatgcctctgctgccaacaccggccag
tacacctgtgagtctgttgagcaggtgaacagccgaccgtacaccaggactatggcagtc
tatcaactgttgccccacactaacctagaggaggagagtgagacgatgacagagtccccc
catagtcacagtaccccattaccagagctcctggaggtaacagagaagccaaaggctttg
gatccccttcccccccctgagtcacagtgtgaagacggcagggtggtaggcctgcaggtg
gtggtggcgctcctctctctgatgctggttggtctagtagcctggagtctgtataaagga
tgctttagaaacagattctcagagaactcaagcgctggccaggtgaaaaggccgtcagat
gactacatgcaaattcaaaacaatataacttcagagttcaagctgctgggacctacaccc
agtcacagtgctaacaagaatcaaaatgctatcatagccttcaaagggaatggggaacac
cacttctctcctggaagcaatatttccactgtggatggtttggggtacattgatgatgag
tcagagatctga
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