Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139407900
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Entry
139407900 CDS
T10872
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2-like
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
139407900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ocla04040
]
139407900
Ion channels [BR:
ocla04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
139407900
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
139407900
NCBI-ProteinID:
XP_071007877
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All DBs
Position
4:complement(89598071..89626066)
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AA seq
491 aa
AA seq
DB search
MMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIWVPDIVLYNNADGEFAVTHMTKA
HLFHNGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLERIENTVDLN
NYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRRLPLFYTINLIIPCLLISCLT
VLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSI
VITVFVLNVHHRSPGTHKMPRWVHSVFLDLIPRWLFMRRPAPDGRRRRLLLLQQGAAVAR
HQGRTTTTRLPGLVRPPCLSTSASWLRDGGGGTTEDPQRRTPCYEDLELGALTSYFSFRP
PSPRPPGSTPPPQQNHPPPGAGQPQNRLDRGGGGRGVNRRVNSTQRPDKIDNLVSESRGV
EFPLSPSVIRALEGLHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTIG
LFLPPWLAGMI
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaccaacgtctggctgaaacaggagtggaatgactacaagctacgctggaag
ccgtctgactacgacaacgtcacgtccatcagagtcccgtctgaactcatctgggtccca
gacatcgtcctctacaacaatgcggacggtgagttcgccgtaacccacatgaccaaggcc
cacctgttccacaatgggaaggtgcgctgggttcccccggccatctataagtcctcctgc
tctatagacgttaccttcttccccttcgaccagcagaactgcaagatgaagtttggttcc
tggacttacgacaaggctaagattgacctggaacgaatcgagaacactgtggatctgaac
aactactgggagagtggagagtgggccatcatcaacgcagtgggaacatacaacaccaag
aagtacgactgctgtcatgagatctaccctgatatcacctacttcttcatcatcagaagg
ctgcctctcttctacaccataaacctgatcatcccctgtctgctcatctcctgtctcacc
gtcctggtcttctatcttccctcagactgtggggagaagatcactctgtgtatctccgtc
ctcctctcccttaccgtcttcctgctcctcatcacggagatcatcccttccacctccctg
gtcatccctctgattggagagtatctcctcttcaccatgatcttcgtcactctctccatc
gtcatcaccgtgtttgtcctcaacgtccaccaccgctccccggggacccataagatgcct
cgctgggtccactctgtcttcctggacctgatccccaggtggctgttcatgaggcggccc
gcgccggacggacggagacgcaggttgttgttgctccagcagggggcagcagtggcacgg
caccagggacggaccaccaccacaagactaccaggcctagtccgtcctccctgcctcagc
acctcagccagctggcttcgggatggaggaggtgggaccacggaggatccccagagacgg
acgccctgttatgaggacctggagctgggggctttgacctcgtacttctccttccgccct
ccgtcacccagacccccgggctccactcctccaccccagcagaaccacccacccccaggg
gcagggcagccccagaaccgcctggacaggggaggaggaggaagaggggtgaatagaagg
gttaactccacccagcgaccggataagatagataacttggtgtcagagtctagaggggta
gagttccctctgtctcccagcgttatacgggctctggaggggctgcactacatcgcagac
catctgagggcagaggacgctgactttagtgtgaaggaagactggaagtacgttgccatg
gtgatcgaccgtatcttcctgtggatgtttatcatcgtgtgtctgctgggtaccatcggt
ctcttccttcctccctggttggccggcatgatctag
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