Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139408316
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Entry
139408316 CDS
T10872
Name
(RefSeq) gamma-secretase subunit Aph-1b
KO
K06172
gamma-secretase subunit APH-1
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139408316
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GFIT
Motif
Pfam:
Aph-1
YqfD
Motif
Other DBs
NCBI-GeneID:
139408316
NCBI-ProteinID:
XP_071008143
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Position
5:complement(9882394..9894522)
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AA seq
254 aa
AA seq
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MTAAVFFGCAFIAFGPAFSLFIFTIAKDPLRVIILIAGAFFWLVSLLLSSLVWFIATKAT
NAQDLTLQKNLLIFGSIFSVILQEVFRFAYYRLLRKANEGLAAISEEDGPPLSVREMAYV
AGLGFGIMSGAFSMINTLSDSLGPGTVGMFGDSQYYFITSALMTLALTMLHTFWGVVFFE
GCERKRWWVIAVVLCVHLMVFSLSLLNPFYVGSILPVYAIMLLMAVWAFFSSGGSLHNIT
LLWTCRKSNTETSS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgcagtgttttttgggtgtgcgttcattgcgtttgggccagcgttttcccta
tttattttcactatcgccaaagacccattgcgagtcatcattctaattgcaggggccttc
ttctggctggtgtccttactgctgtcctctctggtgtggttcatagccacaaaggccacc
aatgcccaggacctgaccctgcagaaaaacctgctcatatttggcagtattttctcagtc
atactgcaggaggtgttccgcttcgcatactacaggctgctcaggaaggcaaatgaggga
ctggcagccatcagtgaagaagacggcccccccctttcagtccgggaaatggcctatgtg
gctggactgggctttggcatcatgagcggagccttctccatgatcaacactctctctgac
tctctgggcccagggacagtgggcatgtttggagactcccagtactacttcatcacctca
gccctgatgaccctggcgctgacgatgctccacaccttctggggggtggtgttctttgag
ggctgtgagaggaagagatggtgggtgatcgctgtggtgctctgtgtccacctgatggtc
ttcagcctgtctctgttgaacccgttctacgtgggcagcattctcccggtctacgccatc
atgctgctgatggccgtctgggccttcttctcctccggtggctccctgcacaacatcact
cttctctggacgtgtaggaaaagtaatacggagacgtcgtcataa
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