Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409464
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Entry
139409464 CDS
T10872
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla00600
Sphingolipid metabolism
ocla01100
Metabolic pathways
Module
ocla_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
139409464
Enzymes [BR:
ocla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
139409464
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
139409464
NCBI-ProteinID:
XP_071010745
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Position
1:complement(60233861..60272005)
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AA seq
570 aa
AA seq
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MDYWSALEVYKEMLLLYLEEGKRLVNTNCEELEPWQIIGATLVSTLGAVWVKGFLFQQET
LTSRLKKQCFRLIRKIPFVGATIQNQLKKALADMSLSLCTLKEGMSYTKQLPEQGLSQVQ
VLDRIREYQTLNEVDWEKGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDLFPGVRKM
EAEIVRMACTLFNGGPNSCGTVTSGGTESILMACKAYRDMAYERGVKHPEIVAPVSVHAA
FDKAANYFGMKLVHIPLDKKTLKVDVKAMRRAINKNTAMLVCSAPQFPHGIIDPIEEVGK
LAVKYNLPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGFAPKGSSVI
LYSDKKYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMYMGEDGYIKTTKKII
DTARTIKTEIRKINGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNTLQYPSSIH
ICCTVLHTQEGVAKQFISEVKEQVALILKNPNEKTTGMGAIYGMAQSIPDRSMVTEISCG
FLDCLYSTEEPRSSQPQKSHINGNSNGKAH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggactattggagtgccttggaggtgtacaaggagatgctactgctctacctggaggaa
ggcaagcgacttgtgaacaccaactgcgaggagctggaaccctggcagatcattggagct
actctcgtatctaccctaggagcagtctgggtcaaaggcttcttgtttcagcaagaaacc
ctgacatcccgactcaagaagcagtgctttcgactcatcagaaaaataccctttgttggc
gcgacaatccagaaccagctgaaaaaggccctggctgacatgtctctcagtctttgcaca
ctgaaggagggcatgagctacactaaacagctgcctgaacaagggcttagccaagttcaa
gttctagacaggatcagagagtatcaaacactgaatgaagtggattgggagaaaggacga
gtttcaggcgcagtgtactggggagatcagacacttaccaaacttttggtgaaggtgtat
ggagactttgcatggagcaacccacttcacccagacctctttcccggtgtgaggaagatg
gaggcagagattgtgagaatggcgtgtaccctcttcaacggtgggcccaactcttgtggc
acagtcacctccggaggaactgaaagcatattgatggcatgcaaggcgtacagagacatg
gcctatgagcggggtgtgaaacatcctgaaattgttgcaccagtcagtgttcatgcagcc
tttgacaaagcagcaaactactttggaatgaagcttgttcacatccccttggacaagaag
accttgaaagtggatgttaaggctatgaggcgagccatcaacaagaacacagccatgctg
gtatgctccgcaccccagttcccccatggaatcattgatcctattgaggaagtaggaaag
ctggctgtaaagtacaacctccctctgcatgtggatgcttgtttgggagggtttctaata
gttttcatggccaaagccaattacccactggctccctttgacttcagggtaaagggtgtg
accagcatctctgcagacacacacaagtacggctttgcccccaaaggttcatcagtgatc
ctctatagtgacaaaaagtacaggcattaccagtattttgtggctccagactggcagggg
ggcatctatgcatccccatcagtggcaggttctcggccaggcggtatcatcgcagcgtgc
tgggccaccatgatgtacatgggagaggatggctacataaagactactaagaagatcatt
gacactgcacgaactatcaagacagaaatccgtaagataaatggagtgtttgtgtttgga
gaccctgaagtgtccgtggtggcaataggctctgacgtcttcgacattttccgtttatcc
aatgcactgacgtcaaagggttggaatctcaacacgctacagtatccatccagcatccat
atctgttgtacagtgctgcacacacaggaaggtgtggccaaacagtttatcagtgaggtc
aaagagcaggtggctctcattttgaagaaccccaatgagaagaccactggaatgggagcg
atctatggcatggcccagtccatccctgacagatccatggtgacagagatctcctgcggt
ttcctggactgcctctacagcacagaggagccaaggtcctctcagccccagaagagccat
ataaatggcaacagcaacggcaaggcccactga
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