Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139409848
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Entry
139409848 CDS
T10872
Name
(RefSeq) LOW QUALITY PROTEIN: steroidogenic factor 1b
KO
K08027
nuclear receptor subfamily 5 group A member 2
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocla03000
]
139409848
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ocla03310
]
139409848
Transcription factors [BR:
ocla03000
]
Eukaryotic type
Zinc finger
Cys4 Fushi tarazu-F1-like
139409848
Nuclear receptors [BR:
ocla03310
]
5. Fushi tarazu-F1 like
5A. Fushi tarazu-F1 like receptor
139409848
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
SMIM5_18_22
Motif
Other DBs
NCBI-GeneID:
139409848
NCBI-ProteinID:
XP_071011335
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All DBs
Position
5:12517497..12534025
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AA seq
495 aa
AA seq
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MLSXKAQGVPLTGMEYTYDVDLEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRY
TCAENQDCKIDKTQRKRCPFCRFQKCLNVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQ
QKKALIRATGLKMETTPPMLSPDTQTDYTFTGSLPGLHPLPKGILHTTTTPIAPTDYDRS
LYGPPSLGMAMPGLPPHAPLPPQYQYASFPSRAIKSEYPDHYTSSPDSVVGSYTYPEQVY
SGPGSPQVPGVPQLVLEFLRCDPDELQVQSKIAAHLQQEQSGQGGKGQERLSPFSLMCHM
ADQTLFSIVEWARSCIFFKELKVGDQMKLLHNCWSELLVLDFISRQVQHGKEGSVLLVTG
QEVELASIASQAGATLTSLVQRGQELVEKLQTLQADRREIACFKFLILFNPDVKLLESQA
FVEGVQEQVNGALLEYTMCAYPQHLDKFSRLLMRLPELKALSAQAEDYLCYKHLSGEVPC
NNLLIEMLHAKRACA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttgaaaagcacaaggtgttccgttgaccggaatggagtacacttatgatgtc
gatttggaagagctatgtcctgtttgtggcgataaggtgtcgggataccactatggacta
ctgacgtgtgaaagctgtaagggtttcttcaaaagaacggttcaaaataataagaggtat
acatgtgcagaaaaccaggattgtaaaattgacaaaactcagaggaaacggtgtccattt
tgtcggtttcagaaatgcctgaatgttggaatgcgattagaagctgtccgagccgatcgc
atgcgaggaggccggaataagtttggccccatgtacaagcgcgaccgagccctcaagcag
cagaagaaagcgttgattcgagccactggcctcaagatggagaccacccctccgatgctg
tcccctgacactcagacagactacaccttcaccggcagtctcccgggcctccacccgctc
cccaagggcatcctccacaccaccacgacccccatcgcccccacagactacgaccgcagc
ctctacggacccccctcactgggcatggctatgcctggactccccccccatgcaccctta
cccccccagtaccagtacgcctccttccccagcagggcgatcaagtccgagtacccggac
cactacacaagctccccagactcggtagtgggcagctacacctacccggagcaggtatac
tctggaccgggctctccgcaggtccccggggtgcctcagctggtgctggagtttctgcga
tgtgacccggacgagctgcaggtgcagagtaagatcgctgctcaccttcagcaggagcag
agtggccaggggggcaagggtcaggagagactcagccccttcagcctaatgtgtcacatg
gctgaccagacgctcttctccatcgtggagtgggcccgaagctgcatcttcttcaaggag
ctcaaggtaggagatcagatgaagctgcttcacaactgctggagcgagctgctggtgttg
gacttcatctccaggcaagtccaacacggcaaggagggcagcgtgctactggtcacaggg
caggaggtggagctggcgtccatagcgtcccaggcaggagccactctcacaagcctggtg
cagagaggacaggagctagttgagaaactacagaccctacaggcggaccgcagagaaatt
gcctgcttcaagttcctcatcctcttcaaccccgatgtgaagctactggagagccaggca
ttcgtggagggcgtccaggagcaggtgaacggggctctgctggagtacaccatgtgtgct
tacccccagcacctggacaagttcagccggctgctgatgcgcctgcctgagctcaaggcc
ttgtcggcacaggccgaggactacctctgctacaagcacctgagcggagaggtgccctgc
aacaacctgctcatcgagatgctgcacgccaagagggcgtgcgcttga
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