Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139413417
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Entry
139413417 CDS
T10872
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139413417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139413417
03041 Spliceosome [BR:
ocla03041
]
139413417
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
139413417
Spliceosome [BR:
ocla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139413417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
OVT1
Peptidase_S10
Sec8_N
DASH_Dad2
COG6_N
SNARE
V_ATPase_I
FUSC
Motif
Other DBs
NCBI-GeneID:
139413417
NCBI-ProteinID:
XP_071016876
LinkDB
All DBs
Position
7:48799660..48806335
Genome browser
AA seq
202 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINVLLKSFTKWCNSTGSPEEGFTQYQRMLGTLAQ
CEFSMGKTLLVYDMNLREMENYEKIYTDIEQNITSAHDKISECKKEIQRAKRIRKNRQEY
DALAKVIQQHPDRHETLKQLEALDKELQQLSHIKENVEDKLELRKKQFHVLLSTIQELQQ
TLDNDEKSENDDAQESSMENGE
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagtaactgatgacgaagttattcgaaaacgtcttctcattgatggagacgga
gctggagacgacagacggatcaatgttctgttgaagagcttcaccaaatggtgcaattca
actgggtctcctgaagaaggattcacacagtaccagaggatgttgggtacattggcacaa
tgtgaattctcaatggggaagaccttgctggtgtatgacatgaacctccgggaaatggaa
aactatgagaaaatatacactgacattgaacaaaacatcacatcagcacatgataaaata
tcagaatgcaaaaaggagatccagagggcaaagagaatacgaaagaatcgtcaagagtat
gatgcactggcaaaggtcatccagcaacatccagatcgccatgaaacactgaagcagttg
gaggcacttgacaaagagctccagcagttgtctcacatcaaagagaatgtggaagataag
ctggagttgaggaagaaacagttccatgtgctcctcagtaccatccaggaactacagcag
acactggataatgatgagaagtcagagaatgatgacgctcaggaaagctccatggagaat
ggagaatga
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