Oncorhynchus clarkii lewisi (westslope cutthroat trout): 139415561
Help
Entry
139415561 CDS
T10872
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
ocla Oncorhynchus clarkii lewisi (westslope cutthroat trout)
Pathway
ocla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ocla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139415561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocla03019
]
139415561
03036 Chromosome and associated proteins [BR:
ocla03036
]
139415561
Messenger RNA biogenesis [BR:
ocla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139415561
Chromosome and associated proteins [BR:
ocla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139415561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
EIF3I
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
139415561
NCBI-ProteinID:
XP_071019772
LinkDB
All DBs
Position
8:complement(20031385..20034010)
Genome browser
AA seq
373 aa
AA seq
DB search
MMEGINAKYVSQKISKTRWRPVSSSSLQQPDIFATGSWDNEDNKISIWSIGENGISGLDD
EFEGDPQLVCEHKHNGDVLDLQFLDQDRIVTASSTGAVIIFRHHHNSQTLSVSQLWERAH
HYPCDNAPCTGIVCNSPEIVTVGEDGRIILFRADQEGVLRTIENADSSTIHDVTFLRTTE
ILTVNSIGQLKIWDFRQQGNEPSQILSLTGDRVPLHCVDRHPNQQHIVATGGQDGMLCIW
DVRQGNMPFSLMEAHSAEMWEVHFHPSNPDHLFSCSEDGSLLHWETSSNSDTPSFLQGGR
NTSIVSRSAIAPAGGNQSLISSWLTGDSSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGT
DGEAIYVNRRVPI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggtatcaatgcaaagtacgtgtcacagaaaatcagtaaaacgagatggaga
ccggtctcatcttcgtctttacagcaaccagacatctttgctactgggtcttgggataac
gaggacaacaaaatttccatttggtccatcggggagaatgggatctccggtttggacgat
gaatttgagggagacccccaattagtatgtgaacacaaacataatggggatgttttggat
cttcaatttctggatcaagacagaattgtaacagcatcatcgactggagcagtgatcatc
tttcggcatcaccacaacagccagacattgtctgtttctcaattgtgggaaagagcacat
cattatccctgcgacaacgctccatgtactggaattgtgtgtaacagccctgagattgtc
acggttggggaagatggaaggatcatcctcttcagagcggaccaggaaggagtgctgcgc
actatagaaaatgctgatagtagcacaatccatgatgtgactttcctaaggactacggag
atccttactgtcaattcaattggccagctcaaaatatgggacttcaggcagcagggcaat
gaaccatcgcagattctttcactaactggggacagagtcccactgcattgtgtggacagg
caccccaaccaacaacacattgtggccacaggggggcaggatggcatgctctgtatctgg
gatgtgagacaaggcaacatgcccttttcacttatggaggcacactctgctgaaatgtgg
gaggtccattttcatccatcaaacccagaccacctgttctcatgctcagaagatggatca
ctgttgcattgggagacttcctcaaattcagacacaccatccttcttacaaggtggacgg
aacacgagcatagtttcgcgcagtgcaatagccccagcaggtgggaaccagtccctcatc
agttcctggctcactggagactcaagtaagggacgccttgagaccactcacatgctgccc
agccagaccctgtctgtgaacagtctggatgtgctgggacaatgcttggtgtgtggaacg
gacggagaggctatttatgtcaacagacgggtcccaatttag
DBGET
integrated database retrieval system
