Afipia carboxidovorans OM4: OCA4_c20670
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Entry
OCA4_c20670 CDS
T01967
Symbol
rpsB
Name
(GenBank) 30S ribosomal protein S2
KO
K02967
small subunit ribosomal protein S2
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OCA4_c20670 (rpsB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oco03011
]
OCA4_c20670 (rpsB)
Ribosome [BR:
oco03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OCA4_c20670 (rpsB)
Bacteria
OCA4_c20670 (rpsB)
Archaea
OCA4_c20670 (rpsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S2
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
AEI03198
LinkDB
All DBs
Position
complement(2251736..2252734)
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AA seq
332 aa
AA seq
DB search
MALPDFTMRQLLEAGVHFGHQAHRWNPKMADFIFGARNNIHIIDLAQTVPLMHRALQAVS
DTVAKGGRILFVGTKRQAQDGVADAAKRSAQYFVNSRWLGGTLTNWKTVSGSIRRLRQLE
EMLGSAEGSQYTKKERLTLQRERDKLDRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQR
LGIPVAAIVDTNCDPKGITYVVPGNDDAGRAIALYCDLIARAAIDGISRAQGDAGIDVGA
LAAPPQEDAVEASKTEGFQGLAGPRGVADDLKKLSGVSGAIEKKLNDLGIFHYWQIAELD
SATAHKIGEEVGLPARVDGWVSQSKSLTADAE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgctacccgacttcaccatgcgtcagctcttggaagctggcgtgcactttggccat
caggcccaccgctggaatccgaagatggccgatttcatcttcggggctcgcaacaacatt
cacatcatcgacctcgcgcagaccgtgccgctgatgcaccgcgcgctgcaggcggtgagc
gacaccgtcgccaagggcggccgcatcctgttcgtcggcaccaagcgccaggcgcaggac
ggcgttgccgacgcggcgaagcgttcggcgcagtatttcgtcaattcccgctggctcggc
ggcacgctcaccaactggaagacggtgtcgggttcgatccgccgtctgcgccagcttgaa
gagatgctcggctcggccgaaggtagccagtacaccaagaaggagcgcctgacgctccag
cgcgagcgcgacaagctcgaccgctcgctcggcggcatcaaggacatgggcggcttgccc
gacctgatcttcgtgatcgacaccaacaaggaagacatcgcgattcaggaagcccagcgt
ctgggcattccggttgcggcgatcgtcgacaccaactgcgacccgaagggcatcacttac
gtcgttccgggcaatgatgacgcgggccgcgcgattgcgctctactgcgacctcatcgcg
cgtgcggcaatcgacggcatttcgcgcgcccagggcgatgcgggcatcgacgtcggtgcg
ctcgctgcgccgccgcaggaagatgcggtcgaggcttccaagaccgaagggttccagggc
ttggcgggtccgcgcggcgttgccgacgacctcaagaagctctccggcgtctccggcgcg
atcgagaagaagctcaacgatctcggcatctttcactactggcagatcgccgaactcgac
tccgccaccgcgcacaagatcggcgaagaggtcggtcttccggcccgcgtcgacggctgg
gtctcccagtcgaagtcgctcaccgcagacgcggaataa
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