Afipia carboxidovorans OM4: OCA4_c24400
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Entry
OCA4_c24400 CDS
T01967
Name
(GenBank) hypothetical protein
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OCA4_c24400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oco03400
]
OCA4_c24400
Enzymes [BR:
oco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
OCA4_c24400
DNA repair and recombination proteins [BR:
oco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OCA4_c24400
RecFOR pathway proteins
OCA4_c24400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AEI03560
LinkDB
All DBs
Position
complement(2616019..2616543)
Genome browser
AA seq
174 aa
AA seq
DB search
MRIDGIILSLDVATNTGWCAGEPGNPNPDFGHFTIPPTGDDVGTYGLKYSAWLKGQLEGL
KPALVIFEAPILPKKTTPTTARKLMGLAMLTEMAARHRGITVREGRASTVKKHFTGNGWA
KKADTMAIARRYGWAVRTDDEADACALWAYAVCCYAPEHATRFALGPIAARQMF
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgacggcatcatcctttcgcttgacgtggcaacgaacaccggatggtgcgcg
ggcgagccgggtaaccccaatcctgacttcggacatttcacgatcccgccgaccggcgac
gatgtcggtacgtacgggctcaaatactcggcatggctgaaaggccagcttgaagggcta
aagcccgcgctcgtcatttttgaagctccgatcctgccgaagaagacaacgccgacaacg
gcgcggaagctgatgggcctcgccatgctgacagaaatggcggcccgtcatcgcggcatc
accgtgcgcgagggcagggcatcgaccgtcaaaaaacatttcaccggcaacgggtgggcc
aagaaggccgacacgatggcgattgctcgccgttacggatgggctgtgcgtaccgatgac
gaggcggatgcctgcgccctctgggcgtacgcggtctgctgctacgcccctgagcacgcc
acgcgctttgcgctcggcccgattgcagcgaggcagatgttctga
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