Oryctolagus cuniculus (rabbit): 100008858
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Entry
100008858 CDS
T03373
Name
(RefSeq) transcription factor GATA-4 isoform X2
KO
K09183
GATA-binding protein 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04022
cGMP-PKG signaling pathway
ocu04218
Cellular senescence
ocu04530
Tight junction
ocu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
100008858
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100008858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100008858
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
100008858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Apidaecin
ArfGap
Motif
Other DBs
NCBI-GeneID:
100008858
NCBI-ProteinID:
XP_002709484
Ensembl:
ENSOCUG00000002199
LinkDB
All DBs
Position
2:complement(38717156..38795759)
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AA seq
443 aa
AA seq
DB search
MYQSLAMAANHGPPPGAYETGGPGAFMHGAGAASSPVYVPTPRVPSSVLGLSYLQGGGGG
AASGAASGSSSGAAPSAAGPGTQQGSPVWSQAGAEGAAYTPPPVSPRFSFPGTTGSLAAA
AAAAAAREAAAYSSSGGAAGAGLAGREQYGRAGFAGSYSSPYPAYMADVGASWAAAAAAS
AGPFDSPVLHSLPGRANPTARHPNLDMFDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNA
CGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMK
LHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAGAAGSESLPPTSSASSNSSNATSSSSSE
EMRPIKTEPGLSSHYGHSSSMSQTFSVSSMSGHGPSIHPVLSALKLSPQGYASPVSQSPQ
ASSKQDSWNSLVLADSHGDIITA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagagcctggccatggccgccaaccacggccccccgcccggagcctacgagacg
ggtggccccggcgccttcatgcacggcgcaggcgccgcgtcctcgccggtctatgtgccc
acgccgcgggtgccctcctcggtgctgggcctgtcctacctccagggcgggggcggcggc
gccgcgtccggagcggcgtcgggcagcagctccggcgcggccccttcggcggcggggccc
gggacgcagcagggcagccccgtctggagccaggcaggagccgagggggcagcctacaca
ccgccgccggtgtcgccgcgcttctccttcccgggaaccactgggtccctggcggccgcg
gccgccgccgctgcggcccgggaagccgcggcctacagctccagcggcggggcggctgga
gcgggcctggcgggccgcgagcagtacgggcgcgcgggcttcgcgggctcctactccagc
ccctatcccgcctacatggccgacgtgggcgcgtcttgggcagcagctgccgccgcctct
gcgggccctttcgacagcccggtcctccacagcctgcccggccgggccaaccccaccgcc
cgacaccccaatcttgacatgtttgatgacttctcggaaggcagagaatgtgtcaactgc
ggggccatgtccaccccgctgtggcggcgggacgggacaggacactacctgtgcaacgcc
tgcggcctctaccacaagatgaacggcatcaaccggcccctcatcaagcctcagcgccga
ctgtccgcctcccgccgagtgggcctctcctgtgccaactgccagacgaccaccaccacg
ctgtggcgccgcaacgccgagggcgagccggtgtgcaatgcctgcggcctctacatgaag
ctccacggggtccccaggcctcttgcgatgcggaaagaggggattcaaaccagaaaacgg
aagcccaagaatcttaacaaatccaagacgccagcaggtgctgcgggcagtgagagcctt
cctcctacgagcagcgcttccagcaactccagcaatgctaccagcagcagcagcagcgaa
gagatgcgccccatcaagacagagcccgggctgtcatctcactatggccacagcagctcc
atgtcccagacgttctcggtcagctccatgtctggccacgggccctccatccacccagtc
ctctcagccctgaagctgtccccacaaggctatgcgtctccagtcagccagtcaccgcag
gccagctccaagcaggactcttggaacagcctggtcttggctgacagtcacggggacata
atcactgcgtaa
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