KEGG   Oryctolagus cuniculus (rabbit): 100008866
Entry
100008866         CDS       T03373                                 
Symbol
SSBP1
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial precursor
  KO
K03111  single-strand DNA-binding protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03430  Mismatch repair
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100008866 (SSBP1)
   03430 Mismatch repair
    100008866 (SSBP1)
   03440 Homologous recombination
    100008866 (SSBP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100008866 (SSBP1)
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100008866 (SSBP1)
   03029 Mitochondrial biogenesis [BR:ocu03029]
    100008866 (SSBP1)
DNA replication proteins [BR:ocu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    100008866 (SSBP1)
DNA repair and recombination proteins [BR:ocu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     100008866 (SSBP1)
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    100008866 (SSBP1)
Mitochondrial biogenesis [BR:ocu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    100008866 (SSBP1)
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-GeneID: 100008866
NCBI-ProteinID: NP_001075600
Ensembl: ENSOCUG00000003799
UniProt: Q95KK4
LinkDB
Position
Unknown
AA seq 148 aa
MFRRPALQVLRQFVRHESEIASSLVLERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLA
TNEMWRSGDNETYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYM
DKNNVRRQATTIIADNIVFLSDQTKEKA
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtttcggaggcctgcgttacaggtgcttcgtcagtttgtaagacatgagtcggaaata
gctagcagtttggttcttgaaagatctctgaatcgtgtgcagttacttgggcgagtaggt
caggaccctgtcatgagacaggtggaaggaaaaaatccagtcacaatattttccctagca
acaaatgagatgtggcggtccggggataatgaaacataccagatgggtgatgttagtcaa
aaaacaacatggcacaggatatcagtattccggccaggcctcagagatgtggcgtatcag
tatgtgaaaaaggggtctcgaatttacgtggaagggaaggtagactatggtgaatacatg
gataaaaataacgtgcggcgacaagcaaccaccatcatcgctgataacattgtctttctg
agtgaccagacgaaagagaaggcatag

KEGG   Oryctolagus cuniculus (rabbit): 100342744
Entry
100342744         CDS       T03373                                 
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial-like
  KO
K03111  single-strand DNA-binding protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03430  Mismatch repair
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100342744
   03430 Mismatch repair
    100342744
   03440 Homologous recombination
    100342744
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100342744
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100342744
   03029 Mitochondrial biogenesis [BR:ocu03029]
    100342744
DNA replication proteins [BR:ocu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    100342744
DNA repair and recombination proteins [BR:ocu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     100342744
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    100342744
Mitochondrial biogenesis [BR:ocu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    100342744
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-GeneID: 100342744
NCBI-ProteinID: XP_051682866
Ensembl: ENSOCUG00000022591
LinkDB
Position
X:complement(98626385..98626893)
AA seq 148 aa
MFRRPALQVLHQFVRHESEIARSLVLERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLA
TNEMWRSGDNETYQMGDVSQKTTWHRISVFQPGLRDVAYQYVKKGSRIYVEGKVDYGEYM
DKNNVRRQATTIIADNIIFLSDQTKEKA
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtttcggaggcctgcgttacaggtgcttcatcagtttgtaagacatgagtcggaaata
gctcgcagtttggttcttgaaagatctctgaatcgtgtgcagttactggggcgagtgggt
caggaccctgtcatgagacaggtggaaggaaaaaatccagtcacaatattttccctagca
acaaatgagatgtggcgatctggggataatgaaacataccaaatgggtgatgttagtcaa
aaaacaacgtggcacagaatatcagtattccagccaggcctcagagatgtggcgtatcag
tatgtgaaaaaggggtctcgaatttacgtggaagggaaggtagactatggtgaatacatg
gataaaaataacgtgcggcgacaagcaaccaccatcatcgctgataacattatctttctg
agtgaccagacgaaagagaaggcatag

KEGG   Oryctolagus cuniculus (rabbit): 100357130
Entry
100357130         CDS       T03373                                 
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial-like
  KO
K03111  single-strand DNA-binding protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03430  Mismatch repair
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100357130
   03430 Mismatch repair
    100357130
   03440 Homologous recombination
    100357130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    100357130
   03400 DNA repair and recombination proteins [BR:ocu03400]
    100357130
   03029 Mitochondrial biogenesis [BR:ocu03029]
    100357130
DNA replication proteins [BR:ocu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    100357130
DNA repair and recombination proteins [BR:ocu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     100357130
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    100357130
Mitochondrial biogenesis [BR:ocu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    100357130
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-GeneID: 100357130
NCBI-ProteinID: XP_051704861
Ensembl: ENSOCUG00000023965
LinkDB
Position
7:148455760..148456381
AA seq 148 aa
MFRRPALQVLRQFVRHESEIASSLVLERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLA
TNEMWRSRDNETYQMGDVSQKTKWHRISVFRPGLRDVAYQYVKKGSRIYVEGKVDYGEYM
DKNNVRQQATTIIADNIIFLSDQTKEKA
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtttcggaggcctgcgttacaggtgcttcgtcagtttgtaagacatgagtcggaaata
gctagcagtttggttcttgaaagatctctgaatcgtgtgcagttactggggcgagtgggt
caggaccctgtcatgagacaggtggaaggaaaaaatccagtcacaatattttccctagca
acaaatgagatgtggcgatccagggataatgaaacataccagatgggtgatgttagtcaa
aaaacaaagtggcacagaatatcagtattccggccaggcctcagagatgtggcgtatcag
tatgtgaaaaaggggtctcgaatttacgtggaagggaaggtagactatggtgaatacatg
gataaaaataacgtgcggcaacaagcaaccaccatcatcgctgataacattatctttctg
agtgaccagacgaaagagaaggcatag

KEGG   Oryctolagus cuniculus (rabbit): 127490310
Entry
127490310         CDS       T03373                                 
Name
(RefSeq) single-stranded DNA-binding protein, mitochondrial-like
  KO
K03111  single-strand DNA-binding protein
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03030  DNA replication
ocu03430  Mismatch repair
ocu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127490310
   03430 Mismatch repair
    127490310
   03440 Homologous recombination
    127490310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ocu03032]
    127490310
   03400 DNA repair and recombination proteins [BR:ocu03400]
    127490310
   03029 Mitochondrial biogenesis [BR:ocu03029]
    127490310
DNA replication proteins [BR:ocu03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    127490310
DNA repair and recombination proteins [BR:ocu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     127490310
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    127490310
Mitochondrial biogenesis [BR:ocu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    127490310
SSDB
Motif
Pfam: SSB
Other DBs
NCBI-GeneID: 127490310
NCBI-ProteinID: XP_051698725
LinkDB
Position
2:113940817..113954399
AA seq 148 aa
MFRRPVLQVLRQFVRHESEIASSLVLERSLNRVQLLGRVGQDPVMRQVEGKNPVTIFSLA
TNEMWRSGDNETYQMGDVSQKTTWHRISVFRPGLRDVAYQYVKKWSRIYVEGKVDYGEYM
DKNNVRRQTTTIIADNIIFLSDQTKEKA
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtttcgaagacctgtgttacaggtgcttcgtcagtttgtaagacatgagtcagaaata
gctagcagtttggttcttgaaagatctctgaatcgtgtgcagttactggggcgagtgggt
caggaccctgtcatgagacaggtggaaggaaaaaatccagtcacaatattttccctagca
acaaatgagatgtggcgatccggggataatgaaacataccaaatgggtgatgttagtcaa
aaaacaacgtggcacagaatatcagtattccggccaggcctcagagatgtggcgtatcag
tatgtgaaaaagtggtctcgaatttatgtggaagggaaggtagactatggtgaatacatg
gataaaaataacgtgcggcgacaaacaaccaccatcattgctgataacattatctttctg
agtgatcagacgaaagagaaggcatag

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