KEGG   Oryctolagus cuniculus (rabbit): 100009327
Entry
100009327         CDS       T03373                                 
Symbol
TUBA1B
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100009327 (TUBA1B)
  09142 Cell motility
   04814 Motor proteins
    100009327 (TUBA1B)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100009327 (TUBA1B)
   05012 Parkinson disease
    100009327 (TUBA1B)
   05014 Amyotrophic lateral sclerosis
    100009327 (TUBA1B)
   05016 Huntington disease
    100009327 (TUBA1B)
   05020 Prion disease
    100009327 (TUBA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    100009327 (TUBA1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100009327 (TUBA1B)
   03036 Chromosome and associated proteins [BR:ocu03036]
    100009327 (TUBA1B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100009327 (TUBA1B)
   04147 Exosome [BR:ocu04147]
    100009327 (TUBA1B)
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100009327 (TUBA1B)
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100009327 (TUBA1B)
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100009327 (TUBA1B)
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100009327 (TUBA1B)
  Exosomal proteins of other body fluids (saliva and urine)
   100009327 (TUBA1B)
  Exosomal proteins of colorectal cancer cells
   100009327 (TUBA1B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100009327
NCBI-ProteinID: NP_001182735
Ensembl: ENSOCUG00000027812
UniProt: A0A5F9CBL0
LinkDB
Position
4:complement(41015654..41050624)
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagacgactccttcaacaccttcttcagtgagacgggcgctggcaag
cacgtgcccagggccgtgtttgtagacctggagcccacggtcattgatgaagttcgcacc
ggcacctaccgccagctcttccaccccgagcagctcatcacgggcaaggaagatgctgcc
aataactatgcccgcgggcactacaccattggcaaggagatcattgacctcgtcctggac
cgaattcgcaagctggctgaccagtgcacgggcctgcagggcttcttggttttccacagc
tttggtgggggaactggttctgggttcacctccctgctgatggaacgcctctctgtcgat
tacggcaagaagtccaagctggagttctccatctacccagccccccaggtttccacagct
gtggtggagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaacgaggccatctatgacatctgtcgtagaaacctcgatatcgag
cgccccacctacactaacctgaaccgccttattagccagatcgtgtcctccatcacggct
tccctgcggtttgacggagccctgaatgttgacctgacagaattccagaccaacctggtg
ccctacccccgcatccacttccctctggccacatacgcccccgtcatctctgctgagaaa
gcctaccacgagcagctttctgtagcagagatcaccaatgcctgctttgagccggccaac
cagatggtgaaatgtgaccctcgccacggtaaatacatggcttgctgcctgctgtaccgt
ggcgacgtggttcccaaagatgtcaatgctgccattgctaccatcaagaccaagcgcagc
atccagtttgtggattggtgccccactggcttcaaggttggcattaactaccagcctccc
acggtggtgcctggtggagacctggccaaggtgcagcgagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggggagggcatggaggagggagagttttctgaa
gctcgtgaggacatggctgccctggagaaggattacgaggaggttggtgtggattctgtt
gaaggtgagggtgaggaggaaggagaggaatactaa

KEGG   Oryctolagus cuniculus (rabbit): 100340483
Entry
100340483         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-1A chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100340483
  09142 Cell motility
   04814 Motor proteins
    100340483
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100340483
   05012 Parkinson disease
    100340483
   05014 Amyotrophic lateral sclerosis
    100340483
   05016 Huntington disease
    100340483
   05020 Prion disease
    100340483
   05022 Pathways of neurodegeneration - multiple diseases
    100340483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100340483
   03036 Chromosome and associated proteins [BR:ocu03036]
    100340483
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100340483
   04147 Exosome [BR:ocu04147]
    100340483
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100340483
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100340483
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100340483
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100340483
  Exosomal proteins of other body fluids (saliva and urine)
   100340483
  Exosomal proteins of colorectal cancer cells
   100340483
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100340483
NCBI-ProteinID: XP_002711147
LinkDB
Position
4:complement(41046729..41050624)
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagacgactccttcaacaccttcttcagtgagacgggcgctggcaag
cacgtgcccagggccgtgtttgtagacctggagcctacggtcattgatgaagttcgcacc
ggcacctaccgccagctcttccaccccgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgcgggcactacaccattggcaaggagatcattgacctcgtcctggac
cgaattcgcaagctggctgaccagtgcacgggcctgcagggcttcttggttttccacagc
tttggtgggggaactggttctgggttcacctccctgctgatggaacgcctctctgtcgat
tacggcaagaagtccaagctggagttctccatctacccagccccccaggtttccacagct
gtggtggagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaacgaggccatctatgacatctgtcgtagaaacctcgatatcgag
cgccccacctacactaacctgaataggttgataggtcaaattgtatcctctatcacagct
tccctgcggtttgacggagccctgaatgttgatctaacagaattccagaccaacctggtg
ccctacccccgcatccacttccctctggccacatacgcccccgtcatctctgctgagaaa
gcctaccacgagcagctttctgtagcagagatcaccaatgcctgctttgagccggccaac
cagatggtgaaatgtgaccctcgccacggtaaatacatggcttgctgcctgctgtaccgt
ggcgacgtggttcccaaagatgtcaatgctgccattgctaccatcaagaccaaacgtacc
atccagtttgtggattggtgccccactggcttcaaggttggcattaactaccagcctccc
acggtggtgcctggtggagacctggccaaggtgcagcgagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggggagggcatggaggagggagagttttctgaa
gctcgtgaggacatggctgccctggagaaggattacgaggaggttggtgtggattctgtt
gaaggtgagggtgaggaggaaggagaggaatactaa

KEGG   Oryctolagus cuniculus (rabbit): 100340939
Entry
100340939         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-8 chain-like isoform X1
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100340939
  09142 Cell motility
   04814 Motor proteins
    100340939
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100340939
   05012 Parkinson disease
    100340939
   05014 Amyotrophic lateral sclerosis
    100340939
   05016 Huntington disease
    100340939
   05020 Prion disease
    100340939
   05022 Pathways of neurodegeneration - multiple diseases
    100340939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100340939
   03036 Chromosome and associated proteins [BR:ocu03036]
    100340939
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100340939
   04147 Exosome [BR:ocu04147]
    100340939
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100340939
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100340939
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100340939
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100340939
  Exosomal proteins of other body fluids (saliva and urine)
   100340939
  Exosomal proteins of colorectal cancer cells
   100340939
SSDB
Motif
Pfam: Tubulin Tubulin_C DUF7281 Tubulin_3
Other DBs
NCBI-GeneID: 100340939
NCBI-ProteinID: XP_051677072
Ensembl: ENSOCUG00000022112
LinkDB
Position
16:complement(16614419..16624888)
AA seq 449 aa
MRECISIHVGQAGVQMGNACWELYCMEHSIQPNGTVLGDKAPASGDDSFNTFFSETRAGR
HVPRAVFVDLEPAVIDGVRTGIYRQLFHPEQLISGKEDAANNYARGHYTVGKEIIDLVLE
RIRKQTDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICRRSLDIECPTYTNLNRLIGQIVSSITA
SLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYSPIISAEKASHEQLSVSEITSACFDPAN
QMVKCDPRHGKYMACCVLYRGDVVPKDVNAAIATIKTKRTVQFVDWCPTGFKVGINYQPP
TVVPGSDLARAQRAVCMLSNTTAIAEAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTESAAGEDDTVDF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgcgagtgcatctccatccacgtgggccaggccggggtgcagatgggcaatgcctgc
tgggagctctactgcatggagcacagtatccaacccaacggcaccgtgctcggcgacaag
gccccggcgagcggcgacgactccttcaacaccttcttcagcgagacgagggctggcagg
cacgtgccccgggctgtctttgtggacctggagcctgccgtcatagatggggtaagaact
ggcatttatagacagctcttccaccctgagcagctaatatctggcaaggaggacgcggcc
aacaactacgcccgtggccactacaccgtggggaaggagatcattgacttggtgctggag
cggatccggaaacagacggatcagtgcaccgggctccagggcttcctggtcttccacagc
ttcgggggcggcaccggctcgggctttacctctctgctgatggagcggctctctgtggac
tacggcaagaagtccaagttggagttcgccatctacccagccccccaagtgtccaccgcg
gtggtggagccctataactccgtcctgaccacccacaccaccctggagcactcggactgc
gccttcatggtggacaacgaggccatctacgacatctgccgtcgcagcctggacatcgag
tgccccacctacaccaacctcaaccggctcatcgggcagatcgtgtcctccatcaccgcc
tccctgcgttttgaaggcgccctcaacgtggacctcacggagttccagaccaacctggtg
ccctacccccgcatccacttcccgctggtgacctactcgcccatcatctcggcggagaag
gcctcccacgagcagctgtcagtctcggagatcaccagcgcctgcttcgaccctgccaat
cagatggtcaagtgtgacccccgccacggcaagtacatggcctgctgcgtgctctaccgt
ggagatgtggtgcccaaggacgtgaacgcggctatcgccaccatcaagaccaagcgcacc
gtccagttcgtggactggtgtcccacaggtttcaaggtgggcatcaactaccagcccccc
accgtggtgcctgggagcgacctggccagggcgcagcgggcagtctgcatgctgagcaac
acgaccgccatcgccgaggcctgggcccgcctcaaccacaagtttgacctcatgtacgcc
aagcgcgcctttgtgcactggtacgtgggcgagggcatggaggagggcgagttctccgag
gcccgagaagacctggccgccttggagaaggattacgaggaggtgggcacagagtctgcg
gccggcgaggacgacaccgtggatttctga

KEGG   Oryctolagus cuniculus (rabbit): 100346652
Entry
100346652         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100346652
  09142 Cell motility
   04814 Motor proteins
    100346652
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100346652
   05012 Parkinson disease
    100346652
   05014 Amyotrophic lateral sclerosis
    100346652
   05016 Huntington disease
    100346652
   05020 Prion disease
    100346652
   05022 Pathways of neurodegeneration - multiple diseases
    100346652
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100346652
   03036 Chromosome and associated proteins [BR:ocu03036]
    100346652
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100346652
   04147 Exosome [BR:ocu04147]
    100346652
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100346652
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100346652
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100346652
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100346652
  Exosomal proteins of other body fluids (saliva and urine)
   100346652
  Exosomal proteins of colorectal cancer cells
   100346652
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100346652
NCBI-ProteinID: XP_002718632
LinkDB
Position
18:complement(47693615..47695123)
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RICKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLQFDGALNVDLTEFQTNLVPYPHIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYHGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYMGEGREEGEFSE
AREDMAALEKDYEEVGADSAEGEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacatggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagacgactccttcaacaccttcttcagtgagacgggcgctggcaag
cacgtgcccagggccgtgtttgtagacctggagcccacggtcattgatgaagttcgcacc
ggcacctaccgccagctcttccaccccgagcagctcatcacgggcaaggaagatgctgcc
aataactatgcccgcgggcactacaccattggcaaggagatcattgacctcgtcctggac
cgaatttgcaagctggctgaccagtgcactggcctgcagggcttcttggttttccacagc
tttggtgggggaactggttctgggttcacctccctgctgatggaacgcctctctgtcgat
tacggcaagaagtccaagctggagttctccatctacccagccccccaggtttccacagct
gtggtggagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaacgaggccatctatgacatctgtcgtagaaacctcgatatcgag
cgccccacctacactaacctgaaccgccttattagccagatcgtgtcctccatcacggct
tccctgcagtttgatggagccctgaatgttgatctgacagaattccagaccaacctggtg
ccctacccccacatccacttccctctggccacatacgcccccgtcatctctgctgagaaa
gcctaccacgagcagctttctgtagcagagatcaccaatgcctgctttgagccggccaac
cagatggtgaaatgtgaccctcgccacggtaaatacatggcttgctgcctgctgtaccat
ggcgacgtggttcccaaagatgtcaatgctgccatcgccaccatcaagaccaagcgcagc
atccagtttgtggattggtgccccactggcttcaaggttggcattaactaccagcctccc
acggtggtgcctggtggagacctggccaaagtgcagcgagctgtgtgcatgctgagcaac
accacagccgtggccgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacatgggggagggcagggaggagggagagttttctgaa
gctcgtgaggacatggctgccctggagaaggattacgaggaggttggagcagacagtgcc
gagggagaggatgagggtgaagaatattaa

KEGG   Oryctolagus cuniculus (rabbit): 100348075
Entry
100348075         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100348075
  09142 Cell motility
   04814 Motor proteins
    100348075
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100348075
   05012 Parkinson disease
    100348075
   05014 Amyotrophic lateral sclerosis
    100348075
   05016 Huntington disease
    100348075
   05020 Prion disease
    100348075
   05022 Pathways of neurodegeneration - multiple diseases
    100348075
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100348075
   03036 Chromosome and associated proteins [BR:ocu03036]
    100348075
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100348075
   04147 Exosome [BR:ocu04147]
    100348075
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100348075
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100348075
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100348075
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100348075
  Exosomal proteins of other body fluids (saliva and urine)
   100348075
  Exosomal proteins of colorectal cancer cells
   100348075
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100348075
NCBI-ProteinID: XP_002714140
LinkDB
Position
11:38444099..38445757
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPSGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggccaggctggtgtccagatcggcaatgcctgc
tgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagacgactccttcaacaccttcttcagtgagacgggcgctggcaag
cacgtgcccagggccgtgtttgtagacctggagcccacggtcattgatgaagttcgcacc
ggcacctaccgccagctcttccaccccgagcagctcatcacgggcaaggaagatgctgcc
aataactatgcccgcgggcactacaccattggcaaggagatcattgacctcgtcctggac
cgaattcgcaagctggctgaccagtgcacgggcctgcagggcttcttggttttccacagc
tttggtgggggaactggttctgggttcacctccctgctgatggaacgcctctctgtcgat
tacggcaagaagtccaagctggagttctccatctacccagccccccaggtttccacagct
gtggtggagccctacaactccatcctcaccacccacaccaccctggagcactctgattgt
gccttcatggtagacaacgaggccatctatgacatctgtcgtagaaacctcgatatcgag
cgccccacctacactaacctgaaccgccttattagccagatcgtgtcctctatcacggct
tccctgcggtttgacggagccctgaatgttgacctgacagaattccagaccaacctggtg
ccctacccccgcatccacttccctctggccacatacgcccccgtcatctctgctgagaaa
gcctaccacgagcagctttctgtagcagagatcaccaatgcctgctttgagccggccaac
cagatggtgaaatgtgaccctcgccacggtaaatacatggcttgctgcctgctgtaccgt
ggcgacgtggttcccaaagatgtcaatgctgccattgctaccatcaagaccaagcgcagc
atccagtttgtggattggtgccccactggcttcaaggttggcattaactaccagcctccc
acggtggtgcctagtggagacctggccaaggtgcagcgagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggggagggcatggaggagggagagttttctgaa
gctcgtgaggacatggctgccctggagaaggattacgaggaggttggtgtggattctgtt
gaaggtgagggtgaggaggaaggagaggaatactaa

KEGG   Oryctolagus cuniculus (rabbit): 100349209
Entry
100349209         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100349209
  09142 Cell motility
   04814 Motor proteins
    100349209
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100349209
   05012 Parkinson disease
    100349209
   05014 Amyotrophic lateral sclerosis
    100349209
   05016 Huntington disease
    100349209
   05020 Prion disease
    100349209
   05022 Pathways of neurodegeneration - multiple diseases
    100349209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100349209
   03036 Chromosome and associated proteins [BR:ocu03036]
    100349209
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100349209
   04147 Exosome [BR:ocu04147]
    100349209
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100349209
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100349209
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100349209
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100349209
  Exosomal proteins of other body fluids (saliva and urine)
   100349209
  Exosomal proteins of colorectal cancer cells
   100349209
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100349209
NCBI-ProteinID: XP_002723497
Ensembl: ENSOCUG00000022998
LinkDB
Position
Unknown
AA seq 493 aa
MTAPQRIRGSTRQLGAVGRACAVVAPAAVEAQERRPAAAAKFSMRECISIHVGQAGVQIG
NACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDE
VRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLI
FHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEH
SDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQT
NLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCM
LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM
LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGV
DSVEAEAEEGEEY
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgactgccccccagcgaatccggggcagcacgaggcagctcggggcggttgggcgcgcg
tgcgccgtggtggctccggcggcagttgaagcccaggagcggcgtccggcggcagcggcg
aagttcagcatgcgcgagtgtatctctatccacgtggggcaggcgggcgtccagatcggc
aacgcctgctgggagttgtactgccttgaacatggcattcagcccgacggtcagatgcca
agtgacaaaaccatcggtggcggtgatgactcgttcaacacgttcttcagtgagacgggg
gcgggcaagcacgtgcccagagccgtgtttgtggacctggagcccacggtggtcgacgag
gtgcgcacgggcacgtacaggcagctgttccacccggagcagctgatcaccgggaaggaa
gacgcggccaacaattatgccaggggccactacaccatcggcaaggagatcgtggacctg
gtgctggaccgcatccgcaaactggcggacctgtgcacggggctgcagggcttcctcatc
ttccacagctttgggggcggcaccggctccgggttcgcgtctctgctcatggagcggctg
tcggtggactatggcaagaagtccaagctggagtttgccatctacccagcgccgcaggtt
tccacggcagtggtggagccgtacaactccatcctgaccacccacacgaccctggaacat
tccgactgtgccttcatggtggacaatgaagccatctatgacatctgtcggcgcaacctg
gacatcgagcgtcccacgtacaccaacctcaaccgcctaatcgggcagatcgtgtcgtcc
atcacggcctccctgcgatttgacggggccctgaatgtggacttgacggagttccagacc
aacctggtgccgtacccccgcatccacttcccgctggccacctacgccccggtcatctcg
gcggagaaggcctaccacgagcagctgtccgtggccgagatcaccaacgcctgcttcgag
ccggccaatcagatggtgaagtgcgaccctcgccacggcaagtacatggcctgctgcatg
ctgtacaggggcgacgtggtcccgaaggacgtcaacgcggccatcgccaccatcaagacc
aagcgcaccatccagtttgtggactggtgccccaccggctttaaggtgggcatcaactac
cagccccccaccgtggtgcccgggggcgacctggccaaggtgcagcgggccgtgtgcatg
ctgagcaacaccacggccatcgccgaggcctgggcccgcctggaccacaagttcgacctc
atgtacgccaagcgggccttcgtgcactggtacgtgggcgaaggcatggaggaaggggag
ttctccgaggcccgcgaggacctggccgccctggagaaggattacgaggaggtgggcgtg
gactccgtggaggcggaggccgaggagggggaggagtactga

KEGG   Oryctolagus cuniculus (rabbit): 100350027
Entry
100350027         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100350027
  09142 Cell motility
   04814 Motor proteins
    100350027
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100350027
   05012 Parkinson disease
    100350027
   05014 Amyotrophic lateral sclerosis
    100350027
   05016 Huntington disease
    100350027
   05020 Prion disease
    100350027
   05022 Pathways of neurodegeneration - multiple diseases
    100350027
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100350027
   03036 Chromosome and associated proteins [BR:ocu03036]
    100350027
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100350027
   04147 Exosome [BR:ocu04147]
    100350027
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100350027
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100350027
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100350027
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100350027
  Exosomal proteins of other body fluids (saliva and urine)
   100350027
  Exosomal proteins of colorectal cancer cells
   100350027
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100350027
NCBI-ProteinID: XP_008266690
Ensembl: ENSOCUG00000026477
UniProt: A0A5F9D8Z8
LinkDB
Position
16:complement(22264657..22276241)
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgcgagtgtatctctatccacgtggggcaggcgggcgtccagatcggcaacgcctgc
tgggagttgtactgtcttgaacatggcattcaacccgacggtcagatgccaagtgacaaa
accattggtggcggtgatgactcgttcaacacgttcttcagtgagacgggggcgggcaag
cacgtgcccagagccgtgtttgtggacctggagcccacagtggtcgacgaagtgcgcacg
ggaacgtacaggcagctgttccacccggagcagctgatcaccgggaaggaagacgcggcc
aacaattacgccaggggccattacaccatcggcaaggagatcgtggacctggtgctggac
cgcatccgcaaactggcggacctgtgcacggggctgcagggcttcctcatcttccacagc
tttgggggcggcaccggctccgggttcgcgtctctgctcatggagcggctgtcggtggac
tatggcaagaagtccaagctggagtttgctatctacccagcgccgcaggtttccacggcc
gtggtggagccgtacaactccatcctgaccacccacacgaccctggaacattccgactgt
gccttcatggtggacaacgaagccatctacgacatctgtcggcgcaacctagacatcgag
cgtcccacgtacaccaaccttaaccgcctgattgggcagatcgtgtcgtccatcacggcc
tccttgcgatttgacggggccctgaacgtggacttaacggagttccagaccaacctggtg
ccgtacccccgcatccacttcccgctggccacctacgccccagtcatctcggcggagaag
gcctaccacgagcagctgtctgtggccgagatcaccaatgcctgcttcgagccggccaat
cagatggtgaagtgcgaccctcgccacggcaagtacatggcctgctgcatgctgtacagg
ggcgacgtggtcccgaaggatgtcaacgcggccatcgccaccatcaagaccaagcgcacc
atccagtttgtggactggtgcccaaccggctttaaggtgggcatcaactaccagcccccc
accgtggtgcccgggggcgacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accacggccatcgccgaggcctgggcccgcctggaccacaagttcgacctcatgtacgcc
aagcgggcctttgtgcactggtacgtgggcgaaggcatggaggaaggggagttctctgag
gctcgcgaggacctggctgccctggagaaggattacgaggaggtgggcgtggactccgtg
gaggcggaggctgaggagggggaggagtactga

KEGG   Oryctolagus cuniculus (rabbit): 100350046
Entry
100350046         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100350046
  09142 Cell motility
   04814 Motor proteins
    100350046
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100350046
   05012 Parkinson disease
    100350046
   05014 Amyotrophic lateral sclerosis
    100350046
   05016 Huntington disease
    100350046
   05020 Prion disease
    100350046
   05022 Pathways of neurodegeneration - multiple diseases
    100350046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100350046
   03036 Chromosome and associated proteins [BR:ocu03036]
    100350046
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100350046
   04147 Exosome [BR:ocu04147]
    100350046
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100350046
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100350046
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100350046
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100350046
  Exosomal proteins of other body fluids (saliva and urine)
   100350046
  Exosomal proteins of colorectal cancer cells
   100350046
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 100350046
NCBI-ProteinID: XP_008272821
Ensembl: ENSOCUG00000013666
LinkDB
Position
Unknown
AA seq 386 aa
MKVEKALETEALYTVKVFHMPCSCSLPDNERVSRLCSGSQHECISIHVAQAGVQIGNACW
ELYCLEHGIQPNGQMPSDKTIGGGGGDDSFNTFFSETGVGKHVPRAMFVDLEPTVVDKVR
TGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDHIRKLADLCTGLQGFFIFH
SFGGGTGSGFASLLMEQLSVHYGKKSKLEFAIHPAPQVSTAVVEPYNSILTTHTTLEYSD
CVFMVDNEAIYDICRRNLDIERPTYTNLNRLIRQIVSSITASLRFDGALNVDLTEFQTSL
VLYPRIHFPLATYAPVILAEKAYHEQLSVAKITNACFELANQMVKCDPCHGKYMACCMLY
RGDVVPKDVNAAIATIKTKLTIQFVD
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaaagttgaaaaagccctagaaactgaagcgttatacactgtgaaagtgtttcacatg
ccctgtagctgcagcttgcctgacaatgagcgagtttcacgtttatgttctggttcccag
cacgagtgtatctctatccatgtggcgcaggcgggcgtccagatcggcaacgcctgctgg
gagttgtactgccttgaacatggcattcagcccaacggtcagatgccaagtgacaaaacc
atcggtggcggtggcggtgatgactcgttcaacacgttcttcagtgagacgggggtgggc
aagcatgtgcccagagccatgtttgttgacctggagcccacggtggttgacaaagtgcgc
acgggcacgtacaggcagctgttccacccggagcagctgatcaccgggaaggaagacgcg
gccaacaattacgccaggggccattacaccatcggcaaggagatcgtggacctcgtgctg
gaccacatccgcaaactggcggacctgtgtacggggctgcagggcttcttcatcttccac
agctttgggggtggcaccggctccgggttcgcatctctgctcatggagcagctgtcggtg
cactatggcaagaagtccaagctggagtttgccatccacccagcgccgcaggtttccacg
gccgtggtggagccgtacaactccatcctgaccacccacacgaccctggaatattctgat
tgtgtcttcatggtggacaatgaagctatctatgacatctgtcggcgcaacctggacatc
gagcgtcccacgtacaccaacctcaaccgcctgatcaggcagatcgtgtcatccatcacg
gcctccctgagattcgacggggccctgaacgtggacttgacggagttccagaccagcctg
gtgctgtacccccgcatccacttcccgctagccacctacgccccggtcatcttggcggag
aaggcctaccacgagcagctgtccgtggccaagatcaccaatgcctgctttgagctggcc
aatcagatggtgaagtgtgacccttgccatggcaagtacatggcctgctgcatgctgtac
aggggtgacgtagtcccgaaggatgtcaacgcggccatcgccaccatcaagaccaagctc
accatccagtttgtggactga

KEGG   Oryctolagus cuniculus (rabbit): 100350967
Entry
100350967         CDS       T03373                                 
Name
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100350967
  09142 Cell motility
   04814 Motor proteins
    100350967
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100350967
   05012 Parkinson disease
    100350967
   05014 Amyotrophic lateral sclerosis
    100350967
   05016 Huntington disease
    100350967
   05020 Prion disease
    100350967
   05022 Pathways of neurodegeneration - multiple diseases
    100350967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100350967
   03036 Chromosome and associated proteins [BR:ocu03036]
    100350967
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100350967
   04147 Exosome [BR:ocu04147]
    100350967
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100350967
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100350967
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100350967
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100350967
  Exosomal proteins of other body fluids (saliva and urine)
   100350967
  Exosomal proteins of colorectal cancer cells
   100350967
SSDB
Motif
Pfam: Tubulin_C Tubulin Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100350967
NCBI-ProteinID: XP_008250340
Ensembl: ENSOCUG00000023547
UniProt: G1TQR3
LinkDB
Position
Unknown
AA seq 415 aa
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgccaagtgacaaaaccatcggtggcggtgatgactcgttcaacacgttcttcagtgag
acgggggcgggcaagcacgtgcccagagccgtgtttgtggacctggagcccacggtggtc
gacgaagtgcgcacgggcacgtacaggcagctgttccacccggagcagctgatcaccggg
aaggaagacgcggccaacaattacgccaggggccactacaccatcggcaaggagatcgtg
gacctggtgctggaccgcatccgcaaactggcggacctgtgcacggggctgcagggcttc
ctcatcttccacagctttgggggcggcaccggctccgggttcgcgtctctgctcatggag
cggctgtcggtggactatggcaagaagtccaagctggagtttgccatctacccagcgccg
caggtttccacggccgtggtggagccgtacaactccatcctgaccacccacacgaccctg
gaacattccgactgtgccttcatggtggacaacgaagccatctatgacatctgtcggcgc
aacctggacatcgagcgtcccacgtacaccaacctcaaccgcctaatcgggcagatcgtg
tcgtccatcacggcctccctgcgattcgacggggccctgaacgtggacttgacggagttc
cagaccaacctggtgccgtacccccgcatccacttcccgctggccacctacgccccggtc
atctcggcggagaaggcctaccatgagcaactgtccgtggccgagatcaccaacgcctgc
ttcgagccggccaatcagatggtgaagtgcgaccctcgccacggcaagtacatggcctgc
tgcatgctgtacaggggcgacgtggtcccgaaggacgtcaacgcggccatcgccaccatc
aagaccaagcgcaccattcagtttgtggactggtgcccgaccggctttaaggtgggcatc
aactaccagccccccaccgtggtgcccgggggcgacctggccaaggtgcagcgggccgtg
tgcatgctgagcaacaccacagccatcgccgaggcctgggcccgcctggaccacaagttc
gacctcatgtacgccaagcgggccttcgtgcactggtacgtgggcgaaggcatggaggaa
ggggagttctccgaggcccgcgaggacctggccgccctggagaaggattacgaggaggtg
ggcgtggactccgtggaggcggaggccgaggagggggaggagtactga

KEGG   Oryctolagus cuniculus (rabbit): 100353478
Entry
100353478         CDS       T03373                                 
Name
(RefSeq) tubulin alpha chain-like 3 isoform X1
  KO
K07374  tubulin alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04145  Phagosome
ocu04210  Apoptosis
ocu04530  Tight junction
ocu04540  Gap junction
ocu04814  Motor proteins
ocu05010  Alzheimer disease
ocu05012  Parkinson disease
ocu05014  Amyotrophic lateral sclerosis
ocu05016  Huntington disease
ocu05020  Prion disease
ocu05022  Pathways of neurodegeneration - multiple diseases
ocu05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100353478
  09142 Cell motility
   04814 Motor proteins
    100353478
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100353478
   05012 Parkinson disease
    100353478
   05014 Amyotrophic lateral sclerosis
    100353478
   05016 Huntington disease
    100353478
   05020 Prion disease
    100353478
   05022 Pathways of neurodegeneration - multiple diseases
    100353478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100353478
   03036 Chromosome and associated proteins [BR:ocu03036]
    100353478
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ocu04812]
    100353478
   04147 Exosome [BR:ocu04147]
    100353478
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100353478
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     100353478
Cytoskeleton proteins [BR:ocu04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100353478
Exosome [BR:ocu04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100353478
  Exosomal proteins of other body fluids (saliva and urine)
   100353478
  Exosomal proteins of colorectal cancer cells
   100353478
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 100353478
NCBI-ProteinID: XP_051690723
Ensembl: ENSOCUG00000015608
LinkDB
Position
Unknown
AA seq 446 aa
MRECLSIHIGQAGIQIGDACWELYCLEHGIQPDGILLDSKQHQLENANMEHMSTSFNTFF
CETRAGNHVPRALFMDLEPTVIDGIRTGKYRSLFHPEQLVSGKEDAANNYARGRYSVGSE
IIDLVLERIRKLAKQCSGLQGFLIFRSFGGGTGSGFTSLLMEQLSAEYSRKTKLEFAVYP
APRISTAVVEPYNSILTTHSTIEHLDCAFMVDNEALYDICHHKLGVERPSYANINRLIGQ
VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTTFAPIISAEKTYHVQPSVSDITA
ACFELSNQLVKCNPQLGKYMACCLLYRGDVIPKDVNAAIAAVKSRNSVQFVDWCPTGFKV
GVNNHPPEVMPGGDLAKLRRAVCMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYIQEGM
EQGEFSEAREDLAALEKDYEEVGHSS
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagggagtgcctttccattcatattggtcaagctggcatccagattggggacgcttgt
tgggaactttattgcctggaacatggaatccagccagatggcatccttcttgacagtaaa
cagcatcagctggaaaatgctaacatggagcatatgagtacatcttttaacaccttcttt
tgtgagacaagggctgggaatcatgtgcccagagcactcttcatggatttagaaccaact
gttatagatggcatacgtactgggaagtaccgttcactcttccatccagagcagctggtt
agtgggaaggaggatgctgcgaacaactacgcacgcggtcgctactctgtggggtcagag
atcatcgatcttgtgctagagaggatccggaagctggcaaagcagtgcagtggactccag
gggtttttgattttccgaagctttggaggaggtactggatcaggatttacatctctctta
atggagcagctctcagcagaatatagcagaaagactaaattggagtttgctgtctatcca
gctcccaggatctccactgctgtagtagagccctacaattccatcctcactacccattct
accatagagcacttggactgtgcctttatggtggacaatgaggccctctatgacatctgc
catcacaaacttggtgttgaacgcccctcttatgccaacattaataggttgataggtcag
gtggtatcttccattactgcttctcttcggtttgaagggcccttgaatgtggacctaatt
gaattccagactaacctagtcccttatccaagaatacattttcccatgacaacctttgcc
cccatcatctctgccgagaaaacctaccatgtgcagccctccgtgtcagacatcactgct
gcttgctttgagctctccaaccagctggtcaagtgtaaccctcagcttgggaagtacatg
gcctgctgcctgctctacaggggggatgtcatccctaaggatgtgaatgcagcaattgca
gctgtgaagtcgaggaactctgttcagttcgtagattggtgtccaactggtttcaaagtg
ggcgtcaacaatcatccaccagaggtgatgccagggggggacctggccaagctccggagg
gctgtctgtatgttgagcaacaccacggcaattgtggaggcctgggcccgcctagaccac
aagtttgacctcatgtatgccaagagggcatttctgcactggtacattcaagaaggcatg
gaacaaggagaattctcagaggccagggaagatttggctgccctggagaaggattatgag
gaagtggggcatagttcctga

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