Oryctolagus cuniculus (rabbit): 100328902
Help
Entry
100328902 CDS
T03373
Symbol
RFX5
Name
(RefSeq) DNA-binding protein RFX5
KO
K08061
regulatory factor X 5
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04612
Antigen processing and presentation
ocu05152
Tuberculosis
ocu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100328902 (RFX5)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100328902 (RFX5)
09163 Immune disease
05340 Primary immunodeficiency
100328902 (RFX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100328902 (RFX5)
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Other basic domains
RF-X
100328902 (RFX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_DNA_bdg
RFX5_N
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
100328902
NCBI-ProteinID:
NP_001164962
Ensembl:
ENSOCUG00000011564
UniProt:
B7NZD5
LinkDB
All DBs
Position
13:41128092..41132891
Genome browser
AA seq
615 aa
AA seq
DB search
MAEDEPDAKSPKTGGRASTGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDND
KLYLYLQLPSGPSTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKY
CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
KGFETPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
AHAHVLKAMGLAEEEEHAPRERSSKSKNGVEHLESGGHKKPEKAAQPPKELEARAGAAGR
GERKKNVVESSAPAANNPQVNALVARLPMLLPRAPRSLIPPIRVSSPILAPKLPSGTLKV
ATLPLPSRPGGPQAAVPIINMILPAVPALPAPGPGQAPSVGLTQAWGTEHREVVMGHGDP
GAHDKSGKRTAEVPVSEASGQDPPAKAAKQDMEDTASDARRKRGRPRKKSGGSGERNSTP
DKSAAAVDSAQASASPWETWGSQRESSFVAGSGSERPGPGGGAEKRAALAPGQEDGTVSR
AGRGPSSRHAKEAEEKTPLAAPKVSVIKGSRSQKEALQLGKAEAGTAAQGTKDFRGHGLQ
ASLARERKDPKEAPP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatgagccggatgccaagagccccaagactgggggccgggcctccacaggt
ggagctgaggctggggagcctaccacccttctccagaggctccgaggtaccatttccaag
gccgtgcaaaacaaagtggaaggaatcctgcaagatgtacagaaattctcagacaacgac
aagctctatctctaccttcagctgccctcagggcccagcaccggagacaaaagctcggag
cccagcacgctcagcaatgaggagtacatgtatgcctataggtggatccgcaaccacctg
gaggagcacacggacacctgtctgcccaagcaaagtgtttatgatgcctatcggaagtac
tgtgagagtcttgcctgttgccgcccgctcagcacagccaactttggcaaaatcatccga
gagatcttccctgacatcaaggcccgaaggcttggtggccggggccagtccaaatactgc
tacagtggcatacgaagaaagaccttggtgtccatgccacccctgcctgggctcgacctt
aagggttttgagaccccggaaatgggcccagaagtcacccctgcacctcgagatgagctg
gtggaggcagcctgcgccctgacctgtgactgggctgaacgaatcctgaaacgctccttc
agttccatcgtggaggtcgcccgcttcctgctgcagcagcatctcatctctgcccggtct
gctcacgcccatgtgcttaaggccatggggcttgctgaagaagaggagcatgcccctagg
gaacggtcttcgaagtccaagaatggtgtagagcacctggagagtggaggccataagaaa
ccagagaaagcagcccagcctcccaaggagctggaagcccgggctggggctgcgggacgt
ggagagcggaagaagaatgtagttgagagctcggccccagcagccaataaccctcaggtt
aatgccctggtggcccggctgcctatgctccttccccgggcccctcgctcacttattcct
ccaatccgagtctcttcgcccatcctggcccccaagcttccttcaggcaccctgaaagtg
gctacactgcccctgcccagtaggcctgggggaccccaggcagctgtgcccatcattaat
atgatcttgccagctgttcctgctctgcccgcgcctgggcctggacaggctccttccgtg
ggactcactcaggcctggggcacagagcacagagaggtagtcatgggtcatggtgacccc
ggagcccatgacaagagtggcaagaggacagctgaggtacccgtgagtgaggccagtggg
caggacccaccagctaaagcagcaaagcaggatatggaggatacagcaagcgatgccaga
aggaagcgggggcgccctcggaagaagtcaggtggaagtggggaaaggaattcgaccccc
gacaagtcagcagctgccgtggactctgcccaggcctcggcgtcaccgtgggaaacgtgg
ggctcccaaagggaaagcagcttcgtggcagggtcagggtcagagaggccggggccaggg
ggaggggccgagaagcgcgcagcgcttgcccccggtcaggaagatggcactgtgtccaga
gcaggaaggggccccagctctcggcatgccaaagaagcggaagaaaaaactcccctcgct
gccccaaaggtcagtgtcatcaagggcagcaggagccaaaaggaggctcttcagctgggg
aaggcagaagcaggcaccgccgcacagggcactaaagacttcagggggcacgggctccaa
gcctccctggcccgtgagcgtaaagaccccaaagaggcacccccatga
Oryctolagus cuniculus (rabbit): 100338019
Help
Entry
100338019 CDS
T03373
Name
(RefSeq) regulatory factor X-associated protein
KO
K08063
regulatory factor X-associated protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04612
Antigen processing and presentation
ocu05152
Tuberculosis
ocu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
100338019
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100338019
09163 Immune disease
05340 Primary immunodeficiency
100338019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
100338019
NCBI-ProteinID:
XP_017205664
Ensembl:
ENSOCUG00000014234
UniProt:
G1T6Z4
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MVGFYRISISGFELITKPLYKALNGLDTHPFELTEEKYEAFQKIVEIKIKAPVSGMPNLD
KSFTLFVAEKQGIAGPAGVETLPRGPRPRRRTRGACAKPRLIFSRVRSPRFAKCRWASQV
LKVWGRGPLPRFSSTEVQSIAEGPGPGPGPGAAGGVPRPGAPGPAAARARTPATVGAPAS
QFTLLVMHSCGAQDEAAAEGVLRPAQGSGGCVGSGKPVRYLCEVAGDADEEAGEDEADLL
DTSDPPGGGESTASLEDLEDEETHSGGEGGGGAARRRGSGGSGTSKTCTYEGCSETTSQV
AKQRKPWMCKKHRNKMYKDKYKKKKSDQALNCGGAASASSTGNVKLEESADNLLSIVKQR
TGSFGDRPARPTLLEQVLNQKRLSLLRSPEVVQFLQKQQQLLNQQVLEQRQQQFPGAPV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtttctacaggatttcaatttcaggatttgagttaataaccaaacccttatat
aaggccttaaatggtctcgacactcatccatttgaactaacagaagagaaatatgaggct
tttcagaagattgtggaaataaaaataaaggctcctgtatcaggaatgcctaatctagac
aagtctttcactctgtttgtagcagagaaacaaggaatagctgggcccgccggcgtggag
acgctcccgcgcgggccacggccgcgcaggcgcactcggggcgcctgcgccaagccgcgc
cttattttctcgcgtgtccggagtccgcggtttgcgaagtgccgttgggcctctcaggtg
cttaaagtctggggtcgcggacccctaccaagattcagcagcacggaggtgcagagtatc
gcggaggggccggggccggggccggggccgggcgctgctggcggcgtgccccgccccggg
gctccgggccctgccgcggcgcgggcccgaactccagccactgtcggggccccggcctcg
cagttcaccctgctggtgatgcactcgtgtggggcgcaggacgaggctgcagccgagggc
gtcctgaggccggcccagggctcggggggctgcgtcggatcgggcaagcctgttaggtac
ctgtgtgaagtggcaggggatgcggacgaggaggcaggggaggacgaggctgacttgctg
gacacttcggacccccccgggggtggcgagagcacggctagtttggaggatctggaggat
gaggagacccactcagggggcgagggcggcggcggagcagcgcggaggcgaggcagcggc
gggagcggcacgagcaagacttgcacgtatgagggctgcagcgagaccacgagccaggtg
gccaagcagcgcaagccgtggatgtgcaagaagcaccgcaacaaaatgtacaaggacaag
tacaaaaagaagaagagcgaccaggccttgaattgcggtggggccgcctcagccagcagc
accggaaacgttaaactggaggaaagtgcagataacttactctccattgttaaacaaaga
actggatcttttggggatcgtcctgcaagacctactcttttagaacaagtgctaaatcag
aagagactgtcattactgagaagtccagaagtagtgcagtttttacagaaacagcaacaa
ctattaaatcagcaagttttggagcaaagacagcagcagttcccaggagcaccagtgtga
Oryctolagus cuniculus (rabbit): 103346995
Help
Entry
103346995 CDS
T03373
Name
(RefSeq) DNA-binding protein RFXANK isoform X1
KO
K08062
regulatory factor X-associated ankyrin-containing protein
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04612
Antigen processing and presentation
ocu05152
Tuberculosis
ocu05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
103346995
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
103346995
09163 Immune disease
05340 Primary immunodeficiency
103346995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
103346995
NCBI-ProteinID:
XP_051684071
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MDLTLSQQSPPTAAHGDPEDPGDEAADGSDTVVLSLFPCTPEPGDAEPEASVSPLQGSSL
KHSTTLTNRQRGNEVSALPATLDSLSIHQLAAQGELSQLKEHLRKGDNLVNKPDERGFTP
LIWASAFGEIETVRFLLDWGADPHILAKERESALSLASMGGYTDIVGLLLERDVDINIYD
WNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKATWCPPTPSE
DQRRAPRHSGNRQPGRAGTPRNWSAPKAAPGQAAAGGEPGRGYPFLRGTNKPSPQSSAWA
VFPRGLPGGGGHPRVLTPPSPPAPAGGR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggacctcacgctcagccagcagtcgccgcccaccgcggcgcacggggaccccgaagac
cccggggatgaagccgccgacggctcggacaccgtggtgctcagccttttcccctgcacc
ccggagcccggggacgccgagcccgaggccagcgtctccccgctgcagggcagctccctg
aagcactccaccacgctcaccaaccggcagcgggggaacgaggtctcggcgctgcccgcc
accctggactccctgtccatccaccagcttgccgcccagggggagctgagccagctgaag
gaacacctgcggaaaggtgacaaccttgtcaacaagccggacgagcgcggcttcaccccc
ctcatctgggcctcggccttcggagagatcgagacagtccggttcctgctggactggggg
gctgacccgcacatcctggccaaggagcgggagagcgccctgtcgctggccagcatgggc
ggctacacggacatcgtggggctgctgttggagcgggacgtggacatcaacatctacgac
tggaacggggggacgccgctgctgtacgccgtgcgtgggaaccacgtgaagtgcgtcgag
gccttactggcccgcggtgctgatctgaccaccgaggccgactccggctacaccccgatg
gacctcgccgtggccttgggataccggaaagcgacctggtgcccgccgaccccgagtgaa
gaccagcgccgggcacccagacactcagggaacagacagccgggcagggccgggacaccc
cgcaactggtcggctccaaaggcagctcctggacaggccgcggcgggaggggagccgggg
agggggtaccccttcctgagaggaaccaataaaccttctccgcagagttcagcttgggcc
gtgtttcctcgagggcttcccggaggaggcggccacccccgagttctcacaccgccttct
cccccagcacccgcaggtggtagatga
DBGET
integrated database retrieval system