KEGG   Oryctolagus cuniculus (rabbit): 100338016
Entry
100338016         CDS       T03373                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9B
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100338016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100338016
   03036 Chromosome and associated proteins [BR:ocu03036]
    100338016
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100338016
   Coactivators
    SAGA/TFTC/STAGA complex
     100338016
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100338016
    STAGA complex
     100338016
    TFTC complex
     100338016
    SAGA complex
     100338016
    SLIK complex
     100338016
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP Histone CENP-T_C LonB_AAA-LID
Other DBs
NCBI-GeneID: 100338016
NCBI-ProteinID: XP_017205439
Ensembl: ENSOCUG00000014717
UniProt: G1T7Y8
LinkDB
Position
X:complement(69861140..69870921)
AA seq 251 aa
MESGKMAPPKNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH
AKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRY
CLTAPNYRLKSLIKKGPNQGRLVPRLNVGAVNSRPTTPTVATPQTVSVPNKVATPVSMTS
QRFTVQIPPSQSAPVKPVPAATSVPNVLINPSMIGPKNILITTNMVSSQNTANESNPLKR
KHEDDDDNDTL
NT seq 756 nt   +upstreamnt  +downstreamnt
atggagtcgggcaagatggcgcctcccaagaacgctccgagagatgctttggtgatggca
cagatcctgaaggatatgggaatcacagagtatgaaccgagggtcataaatcaaatgttg
gaatttgctttccgatatgtgactacaattctggatgatgcaaaaatttattcaagccat
gctaagaaacctaatgttgatgcagatgatgtgagactggcaatccagtgtcgtgctgac
cagtcttttacctctcctcctccaagagatttcttgctggatattgcaagacagaaaaat
caaacccctttgccactaattaagccatatgcaggacccagacttccacctgatagatac
tgcttaacagctccaaactacaggctgaagtccttaattaaaaagggacctaaccaaggc
cgactagttccacgattaaatgttggtgctgtcaatagcaggcctaccactcctactgta
gcaaccccacaaacagtgtctgtcccaaataaagttgcaactccagtgtcaatgacaagc
caaagatttacagtgcagattccaccttctcagtccgcacctgtcaaaccagttcctgca
gcaacttcagttccaaatgttctgattaatccttcaatgattgggcccaaaaatattctt
attactaccaacatggtttcatcacagaacacggccaatgaatcaaacccactgaagaga
aaacatgaagatgatgatgacaatgatactctgtga

KEGG   Oryctolagus cuniculus (rabbit): 100342427
Entry
100342427         CDS       T03373                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9B-like
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100342427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100342427
   03036 Chromosome and associated proteins [BR:ocu03036]
    100342427
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100342427
   Coactivators
    SAGA/TFTC/STAGA complex
     100342427
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100342427
    STAGA complex
     100342427
    TFTC complex
     100342427
    SAGA complex
     100342427
    SLIK complex
     100342427
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP Histone CENP-T_C LonB_AAA-LID
Other DBs
NCBI-GeneID: 100342427
NCBI-ProteinID: XP_051707970
Ensembl: ENSOCUG00000028087
LinkDB
Position
1:complement(177264560..177266268)
AA seq 209 aa
MESGKMAPPKNAPTDSLVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH
AKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPYRY
CLTAPNYRLKSLIKKGPNQGRLVPRLNVGAVNSRPTTPTVATPQTVSVPNKVATPVSMTS
QRVTVQIPPSQSAPVKPGNMIGAGSEICE
NT seq 630 nt   +upstreamnt  +downstreamnt
atggagtcgggcaagatggcacctcccaagaacgctccgacagattctttggtgatggca
cagatcctgaaggatatgggaatcacggagtatgaaccaagggtcataaatcaaatgttg
gaatttgctttccgatatgtgactacaattctggatgatgcaaaaatttattcaagccat
gctaagaaacctaatgttgatgcagatgatgtgagactggcaatccagtgtcgtgctgac
cagtcttttacctctcctcctccaagagatttcttgctggatattgcaagacagaaaaat
caaacccctttgccactaattaaaccatatgcaggacccagacttccaccttatagatac
tgcttaacagctccaaactacaggctgaagtccttaattaaaaagggacctaaccaaggc
cgactagttccacgattaaatgttggtgctgtcaatagcaggcctaccactcctactgta
gcaaccccacaaacagtgtctgtcccaaataaagttgcaactccagtgtcaatgacaagc
caaagagttacagtgcagattccaccttctcagtccgcacctgtcaaaccaggtaacatg
attggggcggggagtgaaatttgtgaataa

KEGG   Oryctolagus cuniculus (rabbit): 127492732
Entry
127492732         CDS       T03373                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9
  KO
K14535  transcription initiation factor TFIID subunit 9
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    127492732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    127492732
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     127492732
   Coactivators
    SAGA/TFTC/STAGA complex
     127492732
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP Histone CENP-T_C LonB_AAA-LID SSRP1_C
Other DBs
NCBI-GeneID: 127492732
NCBI-ProteinID: XP_051709395
LinkDB
Position
11:4058943..4060836
AA seq 264 aa
MESGKMASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH
AKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY
CLTAPNYRLKSLQKKASTSAGRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVATPM
SLTGQRFTVQMPASQSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMVSSQNTASET
NALKRKRDDDDDDDDDDDDDYDNL
NT seq 795 nt   +upstreamnt  +downstreamnt
atggagtctggcaagatggcttctcccaagagcatgccgaaagatgcacagatgatggca
caaatcctgaaggatatggggattacagaatatgagccaagagttataaatcagatgttg
gagtttgcattccgatatgtgaccacaattctagatgatgcaaagatttattcgagccat
gctaagaaagctactgttgatgcagacgatgtgcggttggcaatccagtgtcgtgctgac
cagtcttttacttctcctcccccaagagattttttattagatattgcaaggcaaagaaat
caaacccctttgccattgatcaaaccatattcaggtcctagattgccacctgataggtac
tgtttaaccgctccgaactataggcttaagtctttgcagaaaaaggcgtctacttctgca
ggaagaataacggttccgcggttaagtgttgggtcagttactagcagaccaagtactccc
acactaggcaccccaactccacagaccatgtctgtttctactaaagtagctactccaatg
tccctcacaggacagaggttcacagtacagatgcctgcttcacagtcacccgctgtgaag
gcatcaattcctgcaacatcagcagttcagaatgttctcattaatccatcgttaattggg
tccaaaaacattcttattaccactaatatggtgtcatcacagaatactgccagtgaaaca
aatgcattgaaaagaaaacgtgacgatgatgatgacgatgacgatgatgatgatgatgac
tatgataatttgtaa

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