KEGG   Oryctolagus cuniculus (rabbit): 100338045
Entry
100338045         CDS       T03373                                 
Name
(RefSeq) transcription initiation factor IIE subunit beta
  KO
K03137  transcription initiation factor TFIIE subunit beta
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
ocu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100338045
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100338045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100338045
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     100338045
SSDB
Motif
Pfam: TFIIE_beta TFA2_Winged_2 TFA2_E-tether PhoQ_Sensor
Other DBs
NCBI-GeneID: 100338045
NCBI-ProteinID: XP_002709584
Ensembl: ENSOCUG00000016020
LinkDB
Position
2:77561664..77617174
AA seq 207 aa
MKTRHQRGDTHPLTLEEILDETQHLDIGLKQKQWLMTEALVNNPKIEVIDGKYAFKPKYD
LKDKKALLRLLDQHDQRGLGGILLEDIEEGLPNSQKAVKALGDQILFVNRPDKKKILFFN
DKSCQFSVDEEFQKLWRSVTVDSMDEEKIEEYLKRQGISSMQESGPKKVAPIQRRKKPAS
QKKRRFKTHNEHLAGVLKDYSDITPGK
NT seq 624 nt   +upstreamnt  +downstreamnt
atgaagacacgacatcagcgaggagacacacatcctctaactttagaagaaattttggat
gaaacccagcatttagatattggactcaagcagaaacagtggttaatgactgaggcatta
gtcaacaatcctaaaattgaggtcatagatgggaaatatgctttcaagcctaagtacgac
ttaaaagataagaaggccctgctgaggctcctagatcagcatgaccagcgaggactagga
ggaattcttttagaagacatagaagaaggactgcccaattcccagaaagctgtcaaggct
ttaggggaccagatactttttgtaaatcgtcctgataagaagaaaatacttttcttcaat
gataagagctgtcagttttctgtggatgaagaatttcagaaactctggaggagtgtcact
gtggattcaatggatgaggagaaaattgaagaatatctgaagcgacagggtatttcttcc
atgcaggaatctggaccaaagaaagtggcacccattcagagaaggaaaaagcctgcttcg
cagaaaaagcgacgatttaagactcataatgagcacttggccggcgtgctgaaggattac
tctgacattactcctggcaaatag

KEGG   Oryctolagus cuniculus (rabbit): 100343990
Entry
100343990         CDS       T03373                                 
Name
(RefSeq) general transcription factor IIE subunit 1
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03022  Basal transcription factors
ocu05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100343990
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100343990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ocu03021]
    100343990
Transcription machinery [BR:ocu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     100343990
 Prokaryotic type
  Archaeal type
    TFE
     100343990
SSDB
Motif
Pfam: TFIIE_alpha TFIIE-A_C Zn_Ribbon_TF Cas12f1-like_TNB DUF7385 zf-H2C2_2 Zn_ribbon_PaaD Zf-C2H2_ZNF451_C
Other DBs
NCBI-GeneID: 100343990
NCBI-ProteinID: XP_002716692
Ensembl: ENSOCUG00000002784
UniProt: G1SIB1
LinkDB
Position
14:complement(99168807..99200572)
AA seq 438 aa
MADPDVLTEVPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERD
STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYELLRETEDVNLAYEILEPEPTEIPALKQNKDHATPTAGAAGLPSGHHREAWT
TKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKERPIWLRESTVQGAYGSEEMKEGGI
DMDAFQEREEGRAGPDDNEEVMRALLIHEKKTSSAAAGSVGAAAPAAAANGSDSESETSE
SDDDSPPRPAAVTAHHQEEDEEEDEFEEVADDPIVMVAGRPYSYSEVSQGPELVAQMTPE
EKEAYIAMGQRMFQDLFE
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggcagatccggatgtcctcactgaggttccagctgcattgaagaggttagccaagtat
gtgatccgaggtttttatggcattgagcacgccttggccttggacatcttgatccgaaat
ccctgtgtgaaagaagaggatatgctggagctgctcaagtttgatcggaagcaacttcgg
tcagttttaaataatttaaagggagacaaattcatcaaatgcagaatgagagtagagact
gctgcagatgggaaaaccactcgtcataactactactttatcaattatcgtactcttgtt
aatgtggtaaaatataaattggaccacatgagaagaaggattgaaaccgatgaaagggat
tccaccaaccgggcttccttcaaatgtcctgtctgcagtagtacttttacagacttagaa
gccaatcagctttttgatcccatgacaggaactttccgctgtactttttgtcatacagag
gtagaagaggatgaatcagcaatgcccaaaaaagatgcacgcacacttttggcaaggttt
aatgaacaaattgaacccatttatgaattgcttcgagagacagaggatgtgaacttggcc
tatgaaatacttgaaccagaacccacagaaatcccagccctgaaacagaacaaggaccat
gcaacacctactgctggagctgctggcctaccaagtgggcaccaccgtgaagcatggact
accaaaggtccctcttatgaggacttatacactcagaatgttgtcattaacatggatgac
caagaagatcttcatcgagcttcactggaggggaaatctgccaaagagagacccatttgg
ttgagagagagcactgtccaaggggcatatgggtctgaagagatgaaagaaggtggtata
gatatggatgcatttcaggagcgtgaggaaggccgtgcggggcctgatgataacgaggag
gtcatgcgagcactactcattcatgagaaaaagacttcttctgctgcagcgggctcagtg
ggggcagccgctcctgctgcagctgccaatggcagtgactctgagagtgagaccagtgag
tcagatgatgactctccaccgcgaccagccgctgtgactgcacatcatcaggaagaggac
gaggaggaggatgagtttgaagaagtagcagatgaccccattgtcatggtggctggccgt
ccatactcctacagtgaagtgagccaggggccagagctggtggcccagatgacacctgaa
gagaaagaagcgtacatagcaatgggacagcgtatgtttcaggacctcttcgagtga

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