KEGG   Oryctolagus cuniculus (rabbit): 100338847
Entry
100338847         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 1
  KO
K03172  TNF receptor-associated factor 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04064  NF-kappa B signaling pathway
ocu04210  Apoptosis
ocu04668  TNF signaling pathway
ocu05200  Pathways in cancer
ocu05202  Transcriptional misregulation in cancer
ocu05203  Viral carcinogenesis
ocu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100338847
   04668 TNF signaling pathway
    100338847
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100338847
   05202 Transcriptional misregulation in cancer
    100338847
   05203 Viral carcinogenesis
    100338847
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100338847
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd PilJ XLF_CC
Other DBs
NCBI-GeneID: 100338847
NCBI-ProteinID: XP_002720548
Ensembl: ENSOCUG00000005668
UniProt: G1SPF0
LinkDB
Position
1:6331502..6357554
AA seq 415 aa
MASSSASSPRPAPDENEFPFGCPPSAFQDPAEPRALCCTACLSENLRNCEDRICPACKGD
NPTSVSPGSLRTQEKIHPEVAEAGAGCPFAGVGCSFKGNAQSLQEHEATSQASHLNLLLG
FMKQWKAQLGSGLGSGPMALERNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHL
MKEKLLAELEGKLRVFENIVAVLNKEVEASHLALAASIHQSQLDRERILSLEQRVVELQQ
TLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCLESACGRTVSLFSPAFYTAKY
GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDA
FRPDLSSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETSA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcctcgagctcagccagcagcccccgcccggcccccgatgagaacgagtttcccttt
gggtgcccccccagcgccttccaggacccggcagagcccagggccctgtgctgcacagcc
tgcctctctgagaacctgaggaactgtgaggaccgcatctgtcctgcgtgcaaaggggac
aacccaacctccgtgagccccggaagcctccggacccaggagaagattcaccccgaggtg
gctgaggctggagctgggtgcccctttgcaggtgttggctgctcctttaagggaaacgca
cagtccttgcaggagcatgaggccacctcccaggcctcccacctaaacctgctgttgggg
ttcatgaaacagtggaaggctcagctgggctctggcctggggtccgggcctatggccttg
gagcggaacctgtcagacttgcagctgcaggccgccgtggaggtggcaggggacctggag
gtggactgctaccgggcaccgtgctctgagagccaggaggagctggccctgcagcacctc
atgaaagagaagctcctggccgagctggaggggaagctgcgcgtgttcgagaacatcgtc
gccgtcctcaacaaggaggtggaggcctcccacctggccctggccgcctccatccaccag
agccagctggaccgcgagcgcatcctgagcctggaacagagggtggtggagctgcagcag
accctggcccagaaggaccaagccctgggcaagctggagcagagcctgcgcctcatggag
gaggcctccttcgacggcaccttcctgtggaagatcaccaacgtcaccaggcggtgcctc
gagtctgcctgcggcaggaccgtcagcctcttctccccagctttctacactgccaagtat
ggctacaagttgtgcctgcgactgtacctgaatggggatggcacgggcaagaggacccac
ctgtctctcttcattgtgatcatgagaggggagtacgacgctctgctgccatggcctttc
cggaacaaggtcacctttatgctgcttgaccagaataaccgggagcacgccatcgacgcc
ttccggccggacctcagctctgcgtccttccagcggccccagagtgaaaccaacgtggcc
agcggctgccctctcttcttccccctcaacaagctgcagtcacccaagcatgcctacgtg
aaggacgacaccatgttcctcaagtgcatcgtggagaccagtgcttag

KEGG   Oryctolagus cuniculus (rabbit): 100340005
Entry
100340005         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
  KO
K09849  TNF receptor-associated factor 5
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04064  NF-kappa B signaling pathway
ocu04217  Necroptosis
ocu04621  NOD-like receptor signaling pathway
ocu04657  IL-17 signaling pathway
ocu04668  TNF signaling pathway
ocu05163  Human cytomegalovirus infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05170  Human immunodeficiency virus 1 infection
ocu05200  Pathways in cancer
ocu05203  Viral carcinogenesis
ocu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100340005
   04668 TNF signaling pathway
    100340005
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    100340005
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100340005
   05203 Viral carcinogenesis
    100340005
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100340005
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100340005
   05163 Human cytomegalovirus infection
    100340005
   05169 Epstein-Barr virus infection
    100340005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100340005
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100340005
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING zf-C3HC4_2 zf-C3HC4 RING_XB3-XBAT31 zf-TRAF_2 zf-C3HC4_4 TRAFD1-XIAF1_ZnF DUF4941 zf-RING_2 zf-RING_UBOX Sina_ZnF zf-RING_6 PDZ_3 DUF5713 DUF4279
Other DBs
NCBI-GeneID: 100340005
NCBI-ProteinID: XP_002717577
Ensembl: ENSOCUG00000009132
UniProt: G1SWL7
LinkDB
Position
16:23977530..24021263
AA seq 558 aa
MAYSEEPGGIHLGFIRQNSGSSISLDFEPNAEYRFVEQLEERYKCAFCHSVLHNPHQTGC
GHRFCQHCILSLRELNTVPICPVDKEVIRSQEVFKDNCCKREVLNLHVYCKNAPGCNAKV
ILGRYQEHLQQCLFQVVQCSHDSCQEPVLRRDLNEHLSAYCQFREEKCLYCKKDVVVMDL
QNHEENLCPEYPVSCPNKCLQIIPRTEVNRHLAVCPEAEQDCPFKQYGCTVKEKRGSLQE
HEHSALREHMLLVLEKNFRLEEQISDLCKSLEQKESKIQQLAETVKKFEKEFKQFAQLFG
KNGSFLSNIQVLASHMDKSAWLEAQVRQLLQMVNQQQNKFDLRPLVEAIDTVKQKITLLE
TNDQRLVVLEGETSKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKKKEA
VDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ
RVTLMLLDQSGKRNHIMETFKADPNSSSFKRPDGEMNIASGCPRFVAHSTLENAKNTYIK
EDTLFLKVAVDLTDLEDL
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcttactcggaggagccagggggcatccacttgggtttcatccggcagaattcaggc
agctccatttccttggactttgagcccaacgccgagtaccggtttgtggagcagctggag
gagcgctacaaatgtgccttctgccactcggtgttgcacaacccccaccagacgggttgt
ggccaccgcttctgccagcactgcatcctgtccctgagagaactgaacacagtgccgatc
tgccctgtggataaggaggtgatccgatctcaggaggtgtttaaggacaattgctgcaaa
agggaagtcctcaacttacacgtatattgcaaaaatgctcccggatgcaacgccaaggtt
attctgggacgataccaggagcacctccagcagtgcctgttccaggttgtgcagtgttcc
catgacagctgtcaggagccagtgctgcggagagatctgaacgagcatctgagtgcctac
tgccagtttcgagaggaaaaatgcctgtattgcaaaaaggatgtggtggtcatggatctt
cagaatcacgaggaaaacttgtgtcctgagtacccggtgtcgtgtcccaacaagtgtttg
cagattattccaagaaccgaggtgaaccgccacctggctgtgtgccccgaggccgagcaa
gactgtccttttaagcagtatggctgcactgtgaaggagaagcggggcagcttgcaggag
catgagcactcggccttacgggagcacatgcttctggtgttggaaaagaacttccggctg
gaagagcagatttctgacttatgtaagagcctagagcagaaagaaagtaaaatccagcag
ctagcagagactgtgaagaaatttgaaaaggagtttaagcagtttgcacagttgtttggt
aaaaacggaagcttcctctccaacatccaggtccttgctagtcacatggataagtccgct
tggctagaagctcaggtgcggcagctattacagatggttaaccagcaacaaaataaattt
gacctgagacctttggtggaagccattgatacagtgaaacagaaaataaccctgctggaa
accaacgatcagagattagttgttttagaaggggagactagcaaacacgatgcccacatc
aatatccacaaagcacagctgaataaaaatgaagagcgatttaagctgctagagggtgcc
tgctacaatggaaagctcatctggaaggtgaccgattacaagatgaagaagaaggaggcg
gtggacgggcacactgtgtccatcttcagccagcccttctacaccagccgctgcggctac
cggctctgtgccagagcatacctgaatggggacgggtccgggaaggggacgcacctgtcc
ctgtactttgtggtgatgcgaggggagtttgactcgctgctgcagtggccattcaggcag
agggtgaccttgatgctgctggaccagagtggcaaaagaaaccacattatggagaccttc
aaggctgaccccaacagcagcagctttaaaagacccgacggggagatgaacattgcctct
gggtgtccccgctttgtggctcattccactttggagaatgccaagaacacctacatcaaa
gaggacaccttgttcttgaaagtggccgtggacctcactgacctggaggacctctag

KEGG   Oryctolagus cuniculus (rabbit): 100343190
Entry
100343190         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 6
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04010  MAPK signaling pathway
ocu04064  NF-kappa B signaling pathway
ocu04120  Ubiquitin mediated proteolysis
ocu04140  Autophagy - animal
ocu04144  Endocytosis
ocu04380  Osteoclast differentiation
ocu04620  Toll-like receptor signaling pathway
ocu04621  NOD-like receptor signaling pathway
ocu04622  RIG-I-like receptor signaling pathway
ocu04657  IL-17 signaling pathway
ocu04722  Neurotrophin signaling pathway
ocu04936  Alcoholic liver disease
ocu05132  Salmonella infection
ocu05133  Pertussis
ocu05135  Yersinia infection
ocu05140  Leishmaniasis
ocu05142  Chagas disease
ocu05145  Toxoplasmosis
ocu05152  Tuberculosis
ocu05160  Hepatitis C
ocu05161  Hepatitis B
ocu05162  Measles
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05170  Human immunodeficiency virus 1 infection
ocu05171  Coronavirus disease - COVID-19
ocu05200  Pathways in cancer
ocu05222  Small cell lung cancer
ocu05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
ocu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100343190
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100343190
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100343190
   04140 Autophagy - animal
    100343190
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100343190
   04657 IL-17 signaling pathway
    100343190
  09156 Nervous system
   04722 Neurotrophin signaling pathway
    100343190
  09158 Development and regeneration
   04380 Osteoclast differentiation
    100343190
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100343190
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    100343190
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100343190
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100343190
   05161 Hepatitis B
    100343190
   05160 Hepatitis C
    100343190
   05171 Coronavirus disease - COVID-19
    100343190
   05162 Measles
    100343190
   05169 Epstein-Barr virus infection
    100343190
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    100343190
   05133 Pertussis
    100343190
   05152 Tuberculosis
    100343190
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100343190
   05140 Leishmaniasis
    100343190
   05142 Chagas disease
    100343190
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100343190
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    100343190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ocu04131]
    100343190
   04121 Ubiquitin system [BR:ocu04121]
    100343190
Enzymes [BR:ocu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100343190
Membrane trafficking [BR:ocu04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    100343190
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100343190
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 zf-TRAF_2 Sina_ZnF SlyX TRAF3_RING RING_XB3-XBAT31 U-box zf-RING_11 EzrA Spc29 DUF7310 DUF4455 DUF3450 PspA_IM30 Med21 UPF0242 Myosin_tail_1 DUF16 TMF_DNA_bd
Other DBs
NCBI-GeneID: 100343190
NCBI-ProteinID: XP_002709100
Ensembl: ENSOCUG00000012011
LinkDB
Position
1:complement(189556117..189577862)
AA seq 540 aa
MSLLNCENSCGSGQSESDCCAAMASSCSAAAKDDSVSGTASTGNLSGSFVEDIQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLTVKCPNEGCLHKMELRHLEDHQAHCGFALVNCPQCQRPFQKCQINTHILK
DCPRRQVSCINCAVSMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI
PCTFSTFGCHEKMQRNHLARHLQEKTQLHMRMLAQAVHSLNLALTPIPPRDVPQYDVPSQ
PRVPSGYPEGHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKVA
EIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQR
CANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQRP
TIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDAGV
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgagtctgctaaactgtgaaaacagctgtggatctggccagtctgaaagtgactgctgt
gcggccatggccagctcatgcagtgctgcagccaaagatgacagtgtgagtgggactgcc
agcacggggaacctttctggctcgtttgtggaagacatccagggatatgatgtggagttc
gacccacccctggaaagcaagtatgaatgccccatctgcttaatggcgttacgggaagca
gtgcagaccccatgcggccataggttctgcaaagcctgcatcatcaaatcaataagggat
gcaggccacaaatgtccagttgacaatgaaatactattggaaaatcagctatttcctgac
aattttgcaaagcgagagattctttctctgacagtgaagtgtccaaatgaaggttgtttg
cacaagatggaactgaggcatcttgaggatcatcaagcacattgtgggtttgctcttgtg
aattgtcctcagtgccaacgtcctttccagaaatgccaaattaatactcacatcctcaag
gattgtccaaggagacaagtttcttgtataaactgtgcggtatccatggcatttgaagat
aaagagatccatgaccagaactgtcctttggcaaatgtcatttgtgaatactgcaatacc
atgctcatcagagaacagatgcctaatcattatgatctagactgccctaccgctccaatt
ccatgtacattcagtacttttggctgccatgaaaagatgcagaggaatcacttggcacgc
cacctacaagagaaaacccagttgcacatgagaatgttggcccaggctgttcatagtttg
aaccttgctttaactcccatacctccacgtgatgtgcctcagtacgatgttccttctcag
ccccgggttccctccgggtatccagagggccacaacttccaggaaactattcagcagtta
gagggtcgccttgtaagacaagaccatcaaattagggagctgactgcaaaaatggaaact
cagagcatgtacgtaagtgagctcaaaagaactattcgaacccttgaggacaaagttgct
gaaattgaagcacagcagtgtaatggaatttacatctggaagatcggcaactttgggatg
catttaaaatctcaagaagaggagaaacctgttgttattcacagccctggattctacacg
ggcaaacccggatacaaactctgcatgcgcttgcaccttcagttaccaactgctcagcgc
tgtgcaaactatatatccctctttgtgcatacaatgcaaggagagtatgacagccacctt
ccttggcccttccagggtacaatacgccttacaattcttgatcagtctgaagcacccata
aggcaaaaccatgaagagataatggatgccaaaccagagttacttgccttccagcggccc
acaattccacggaacccaaaaggttttggctatgtaacttttatgcaccttgaagcctta
cgacaaagaacctttataaaggatgatacgttattagtgcgctgtgaagtctctacccgc
tttgacatgggtagccttcggagggagggttttcagcctcgaagtactgatgcaggggta
tag

KEGG   Oryctolagus cuniculus (rabbit): 100344600
Entry
100344600         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 4 isoform X2
  KO
K09848  TNF receptor-associated factor 4
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04657  IL-17 signaling pathway
ocu05200  Pathways in cancer
ocu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    100344600
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100344600
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100344600
SSDB
Motif
Pfam: zf-TRAF TRAF-mep_MATH MATH_2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-Nse zf-RING_5 zf-TRAF_2 zf-RING_2 zf-RING_6 TRAF3_RING zf-C3HC4_4 Sina_ZnF zf-rbx1 MATH
Other DBs
NCBI-GeneID: 100344600
NCBI-ProteinID: XP_002718965
Ensembl: ENSOCUG00000000859
UniProt: G1SE83
LinkDB
Position
19:complement(17008739..17014823)
AA seq 470 aa
MPGFDYKFLEKPKRRLLCPLCGKPMREPVQVSTCGHRFCDTCLQEFLSEGVFKCPEDQLP
LDYAKIYPDPELEVQVLGLPIRCIHSEEGCRWSGPLRHLQGHLNTCSFNVVACPNRCPAK
LSRRDLPAHLQHDCPKRRLKCEFCGCDFSGEAYESHEGMCPQESVYCENKCGSRMMRRLL
AQHATSECPKRTQPCTYCTKEFVFDTIQSHQYQCPRLPVPCPNQCGVGTVAREDLPGHLK
DSCSTALVLCPFKDSGCKHRCPKLAMARHVEESVKPHLAMMCALVSRQRQELQELRRELE
ELSVGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEG
THLSLYIRVLPGAFDNLLEWPFARRVTFSLLDQSDPGLAKPQHVTETFHPDPNWKNFQKP
GTWRGSLDESSLGFGYPKFISHQDIRKRNYVRDDAVFIRASVELPRKILS
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgcccggcttcgactacaagttcctggagaagcccaagcggcggctgctgtgcccattg
tgcgggaagcccatgcgtgagcccgtgcaggtttctacctgcggccaccgcttctgcgac
acctgcctacaggagttcctcagtgaaggagtcttcaaatgccctgaggaccaacttcct
ctagactatgccaagatctacccagacccagagctggaagtccaggtgttgggcctgccg
atccgctgcatccacagtgaggagggctgccgctggagtgggccactgcgccacctacag
ggccacctgaatacctgcagcttcaatgtagttgcctgccccaatcgctgccccgccaag
ctgagccgccgcgatctgcctgcgcacttgcagcacgactgccccaagcggcgcctcaag
tgcgagttttgtggctgcgacttcagtggagaggcctatgagagccacgagggcatgtgc
ccccaagagagcgtatactgtgagaacaagtgcggctcccgcatgatgcggcggctgctg
gcccagcatgccacctctgagtgccccaagcgcacccagccttgcacctactgcaccaag
gagtttgtctttgataccatccagagccaccaataccagtgcccacggctgcctgtgccc
tgccccaaccagtgtggtgtgggcaccgtggcccgggaggacctgccaggccatctgaag
gacagctgcagcaccgccttggtgctgtgcccgttcaaagactccggctgcaagcacagg
tgccctaagctggcgatggcgcgacacgtggaggagagtgtgaagccacatctggccatg
atgtgtgccctggtgagccggcaacggcaggagctgcaggagctgcggcgagagcttgag
gagctgtctgtgggcagcgacggtgtgctcatctggaagattggcagctatgggcggcgg
ctgcaggaggccaaggccaagccgaaccttgagtgcttcagcccagccttctacacccat
aagtacggctacaagctgcaggtgtctgcgttcctcaatggcaacggcagtggtgagggc
acacatctctccctctacatccgcgtactgccgggtgcctttgacaatctccttgagtgg
ccctttgcccgccgtgtcaccttctccctgctggatcagagcgaccctgggctggctaag
ccacagcacgtcactgagaccttccaccctgacccaaactggaagaacttccaaaagcca
ggcacatggcgtggctctctggatgagagctctctgggctttgggtaccccaaattcatc
tcccaccaggatatccgaaagcggaactatgtgcgagatgatgccgtcttcatccgtgcc
tctgttgaacttcccaggaagatcctcagctga

KEGG   Oryctolagus cuniculus (rabbit): 100359083
Entry
100359083         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
  KO
K03174  TNF receptor-associated factor 3
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04064  NF-kappa B signaling pathway
ocu04620  Toll-like receptor signaling pathway
ocu04621  NOD-like receptor signaling pathway
ocu04622  RIG-I-like receptor signaling pathway
ocu04657  IL-17 signaling pathway
ocu04668  TNF signaling pathway
ocu04936  Alcoholic liver disease
ocu05160  Hepatitis C
ocu05161  Hepatitis B
ocu05162  Measles
ocu05164  Influenza A
ocu05165  Human papillomavirus infection
ocu05167  Kaposi sarcoma-associated herpesvirus infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05171  Coronavirus disease - COVID-19
ocu05200  Pathways in cancer
ocu05203  Viral carcinogenesis
ocu05222  Small cell lung cancer
ocu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100359083
   04668 TNF signaling pathway
    100359083
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100359083
   04657 IL-17 signaling pathway
    100359083
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100359083
   05203 Viral carcinogenesis
    100359083
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100359083
  09172 Infectious disease: viral
   05161 Hepatitis B
    100359083
   05160 Hepatitis C
    100359083
   05171 Coronavirus disease - COVID-19
    100359083
   05164 Influenza A
    100359083
   05162 Measles
    100359083
   05167 Kaposi sarcoma-associated herpesvirus infection
    100359083
   05169 Epstein-Barr virus infection
    100359083
   05165 Human papillomavirus infection
    100359083
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100359083
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    100359083
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF3_RING zf-TRAF zf-C3HC4 zf-C3HC4_2 MPS2 zf-RING_UBOX Spc29 ATG16 zf-RING_5 KxDL Crescentin FliJ DUF1664 GAS LMBR1 DUF3450 T3SSipB V_ATPase_I BLOC1_2 ADIP
Other DBs
NCBI-GeneID: 100359083
NCBI-ProteinID: XP_051690822
Ensembl: ENSOCUG00000003672
LinkDB
Position
Unknown
AA seq 568 aa
MESSKKMDSPGTVQANPPLKLHPDRGAGTAVFAPEQGGYKEKFVKTVEDKYKCEKCRLVL
CNPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQICCRNE
SRGCAEQLALGHLLVHLKNDCQFEELACVRADCKEKVLRKDLRDHVEKACKYREATCSHC
KSQVPMITLQKHEDTECPCVVVSCPHKCSVLTLLRSELSAHLSECVNAPSTCSFKRYGCV
FQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI
EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR
VTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW
KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG
EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFRKPTGEMNIASGCPVFVAQ
TVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggagtcaagtaaaaagatggactcccctggcacagtgcaggcaaacccaccgctgaag
ctgcaccctgaccggggcgctgggacagctgttttcgcccctgagcagggaggctacaag
gagaagtttgtgaagactgtggaggacaagtacaagtgtgagaagtgccgcctggtgctg
tgcaacccgaagcagaccgagtgtgggcaccggttctgtgagagctgcatggctgccctg
ttgagctcctcaagtccgaaatgtaccgcgtgtcaagaaagcattgtgaaagacaaggtg
ttcaaggacaactgctgcaagagagagattctggcccttcagatctgctgtcggaacgag
agcagaggctgtgcggagcagttggcactggggcatctgctggtacatctaaaaaatgac
tgccagttcgaggaacttgcctgtgtgcgcgctgactgcaaagagaaggtgctgaggaag
gatctgcgcgaccatgtggagaaggcctgcaagtaccgcgaggccacgtgcagccactgc
aagagccaggtccccatgatcaccctgcagaaacacgaggacaccgagtgtccctgcgtg
gtggtgtcgtgccctcacaagtgcagcgtgctgaccctgctgaggagcgagttgagtgca
cacttgtcagagtgtgtcaatgcccccagcacctgtagttttaagcgctatggctgcgtt
tttcaggggacgaaccagcagatcaaggcccacgaggccagctcggcggtacagcacgtc
aacctgctcaaggagtggagcaactccctggagaagaaggtttccttgctgcaaaatgaa
agtgtagaaaaaaacaagagtatacaaagtctgcacaatcagatatgtagctttgaaatt
gaaattgagagacaaaaggagatgcttcgaaataatgaatccaaaatacttcatttacag
cgagtaatagacagccaagcagagaagctaaaggagctggacaaggagatccgccccttc
cggcagaactgggaggaggccgacagcatgaagagcagcgtggagtcgctccagaaccgc
gtgaccgagctggaaagtgtggacaaaagtgccgggcaggcggctcgcaacacaggcttg
ctggagtcccagctgagccggcacgaccagatgctgagcgttcatgacatccgcctggcg
gacatggacctgcgcttccaggtcctggagaccgccagctacaacggcgtgctgatctgg
aagatccgagattataagcggcggaagcaggaggccgtgatggggaagaccctgtccctt
tacagccagcctttctacacgggctattttggctataagatgtgcgccagggtctacctg
aatggggacgggatggggaaggggacacacttgtcactgttctttgtcatcatgcgtgga
gagtatgatgccttgcttccttggccgtttaagcagaaagtgacgctcatgttaatggat
caggggtcctcgcggcgccacctgggagacgcgttcaagcctgaccccaacagcagcagc
ttccggaagcccacaggggagatgaacatcgcctctggctgccccgtctttgtggcccaa
actgtcctggaaaacgggacgtatattaaagatgatacaatttttattaaagtcatagtg
gatacttcggatctgcccgacccctga

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