KEGG   Oryctolagus cuniculus (rabbit): 100338847
Entry
100338847         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 1
  KO
K03172  TNF receptor-associated factor 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04064  NF-kappa B signaling pathway
ocu04210  Apoptosis
ocu04668  TNF signaling pathway
ocu05200  Pathways in cancer
ocu05202  Transcriptional misregulation in cancer
ocu05203  Viral carcinogenesis
ocu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100338847
   04668 TNF signaling pathway
    100338847
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100338847
   05202 Transcriptional misregulation in cancer
    100338847
   05203 Viral carcinogenesis
    100338847
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100338847
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd PilJ XLF_CC
Other DBs
NCBI-GeneID: 100338847
NCBI-ProteinID: XP_002720548
Ensembl: ENSOCUG00000005668
UniProt: G1SPF0
LinkDB
Position
1:6331502..6357554
AA seq 415 aa
MASSSASSPRPAPDENEFPFGCPPSAFQDPAEPRALCCTACLSENLRNCEDRICPACKGD
NPTSVSPGSLRTQEKIHPEVAEAGAGCPFAGVGCSFKGNAQSLQEHEATSQASHLNLLLG
FMKQWKAQLGSGLGSGPMALERNLSDLQLQAAVEVAGDLEVDCYRAPCSESQEELALQHL
MKEKLLAELEGKLRVFENIVAVLNKEVEASHLALAASIHQSQLDRERILSLEQRVVELQQ
TLAQKDQALGKLEQSLRLMEEASFDGTFLWKITNVTRRCLESACGRTVSLFSPAFYTAKY
GYKLCLRLYLNGDGTGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDA
FRPDLSSASFQRPQSETNVASGCPLFFPLNKLQSPKHAYVKDDTMFLKCIVETSA
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggcctcgagctcagccagcagcccccgcccggcccccgatgagaacgagtttcccttt
gggtgcccccccagcgccttccaggacccggcagagcccagggccctgtgctgcacagcc
tgcctctctgagaacctgaggaactgtgaggaccgcatctgtcctgcgtgcaaaggggac
aacccaacctccgtgagccccggaagcctccggacccaggagaagattcaccccgaggtg
gctgaggctggagctgggtgcccctttgcaggtgttggctgctcctttaagggaaacgca
cagtccttgcaggagcatgaggccacctcccaggcctcccacctaaacctgctgttgggg
ttcatgaaacagtggaaggctcagctgggctctggcctggggtccgggcctatggccttg
gagcggaacctgtcagacttgcagctgcaggccgccgtggaggtggcaggggacctggag
gtggactgctaccgggcaccgtgctctgagagccaggaggagctggccctgcagcacctc
atgaaagagaagctcctggccgagctggaggggaagctgcgcgtgttcgagaacatcgtc
gccgtcctcaacaaggaggtggaggcctcccacctggccctggccgcctccatccaccag
agccagctggaccgcgagcgcatcctgagcctggaacagagggtggtggagctgcagcag
accctggcccagaaggaccaagccctgggcaagctggagcagagcctgcgcctcatggag
gaggcctccttcgacggcaccttcctgtggaagatcaccaacgtcaccaggcggtgcctc
gagtctgcctgcggcaggaccgtcagcctcttctccccagctttctacactgccaagtat
ggctacaagttgtgcctgcgactgtacctgaatggggatggcacgggcaagaggacccac
ctgtctctcttcattgtgatcatgagaggggagtacgacgctctgctgccatggcctttc
cggaacaaggtcacctttatgctgcttgaccagaataaccgggagcacgccatcgacgcc
ttccggccggacctcagctctgcgtccttccagcggccccagagtgaaaccaacgtggcc
agcggctgccctctcttcttccccctcaacaagctgcagtcacccaagcatgcctacgtg
aaggacgacaccatgttcctcaagtgcatcgtggagaccagtgcttag

KEGG   Oryctolagus cuniculus (rabbit): 100340005
Entry
100340005         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
  KO
K09849  TNF receptor-associated factor 5
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04064  NF-kappa B signaling pathway
ocu04217  Necroptosis
ocu04621  NOD-like receptor signaling pathway
ocu04657  IL-17 signaling pathway
ocu04668  TNF signaling pathway
ocu05163  Human cytomegalovirus infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05170  Human immunodeficiency virus 1 infection
ocu05200  Pathways in cancer
ocu05203  Viral carcinogenesis
ocu05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100340005
   04668 TNF signaling pathway
    100340005
 09150 Organismal Systems
  09151 Immune system
   04657 IL-17 signaling pathway
    100340005
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100340005
   05203 Viral carcinogenesis
    100340005
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100340005
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100340005
   05163 Human cytomegalovirus infection
    100340005
   05169 Epstein-Barr virus infection
    100340005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ocu04121]
    100340005
Ubiquitin system [BR:ocu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    100340005
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING zf-C3HC4_2 zf-C3HC4 RING_XB3-XBAT31 zf-TRAF_2 zf-C3HC4_4 TRAFD1-XIAF1_ZnF DUF4941 zf-RING_2 zf-RING_UBOX Sina_ZnF zf-RING_6 PDZ_3 DUF5713 DUF4279
Other DBs
NCBI-GeneID: 100340005
NCBI-ProteinID: XP_002717577
Ensembl: ENSOCUG00000009132
UniProt: G1SWL7
LinkDB
Position
16:23977530..24021263
AA seq 558 aa
MAYSEEPGGIHLGFIRQNSGSSISLDFEPNAEYRFVEQLEERYKCAFCHSVLHNPHQTGC
GHRFCQHCILSLRELNTVPICPVDKEVIRSQEVFKDNCCKREVLNLHVYCKNAPGCNAKV
ILGRYQEHLQQCLFQVVQCSHDSCQEPVLRRDLNEHLSAYCQFREEKCLYCKKDVVVMDL
QNHEENLCPEYPVSCPNKCLQIIPRTEVNRHLAVCPEAEQDCPFKQYGCTVKEKRGSLQE
HEHSALREHMLLVLEKNFRLEEQISDLCKSLEQKESKIQQLAETVKKFEKEFKQFAQLFG
KNGSFLSNIQVLASHMDKSAWLEAQVRQLLQMVNQQQNKFDLRPLVEAIDTVKQKITLLE
TNDQRLVVLEGETSKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKKKEA
VDGHTVSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ
RVTLMLLDQSGKRNHIMETFKADPNSSSFKRPDGEMNIASGCPRFVAHSTLENAKNTYIK
EDTLFLKVAVDLTDLEDL
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcttactcggaggagccagggggcatccacttgggtttcatccggcagaattcaggc
agctccatttccttggactttgagcccaacgccgagtaccggtttgtggagcagctggag
gagcgctacaaatgtgccttctgccactcggtgttgcacaacccccaccagacgggttgt
ggccaccgcttctgccagcactgcatcctgtccctgagagaactgaacacagtgccgatc
tgccctgtggataaggaggtgatccgatctcaggaggtgtttaaggacaattgctgcaaa
agggaagtcctcaacttacacgtatattgcaaaaatgctcccggatgcaacgccaaggtt
attctgggacgataccaggagcacctccagcagtgcctgttccaggttgtgcagtgttcc
catgacagctgtcaggagccagtgctgcggagagatctgaacgagcatctgagtgcctac
tgccagtttcgagaggaaaaatgcctgtattgcaaaaaggatgtggtggtcatggatctt
cagaatcacgaggaaaacttgtgtcctgagtacccggtgtcgtgtcccaacaagtgtttg
cagattattccaagaaccgaggtgaaccgccacctggctgtgtgccccgaggccgagcaa
gactgtccttttaagcagtatggctgcactgtgaaggagaagcggggcagcttgcaggag
catgagcactcggccttacgggagcacatgcttctggtgttggaaaagaacttccggctg
gaagagcagatttctgacttatgtaagagcctagagcagaaagaaagtaaaatccagcag
ctagcagagactgtgaagaaatttgaaaaggagtttaagcagtttgcacagttgtttggt
aaaaacggaagcttcctctccaacatccaggtccttgctagtcacatggataagtccgct
tggctagaagctcaggtgcggcagctattacagatggttaaccagcaacaaaataaattt
gacctgagacctttggtggaagccattgatacagtgaaacagaaaataaccctgctggaa
accaacgatcagagattagttgttttagaaggggagactagcaaacacgatgcccacatc
aatatccacaaagcacagctgaataaaaatgaagagcgatttaagctgctagagggtgcc
tgctacaatggaaagctcatctggaaggtgaccgattacaagatgaagaagaaggaggcg
gtggacgggcacactgtgtccatcttcagccagcccttctacaccagccgctgcggctac
cggctctgtgccagagcatacctgaatggggacgggtccgggaaggggacgcacctgtcc
ctgtactttgtggtgatgcgaggggagtttgactcgctgctgcagtggccattcaggcag
agggtgaccttgatgctgctggaccagagtggcaaaagaaaccacattatggagaccttc
aaggctgaccccaacagcagcagctttaaaagacccgacggggagatgaacattgcctct
gggtgtccccgctttgtggctcattccactttggagaatgccaagaacacctacatcaaa
gaggacaccttgttcttgaaagtggccgtggacctcactgacctggaggacctctag

KEGG   Oryctolagus cuniculus (rabbit): 100359083
Entry
100359083         CDS       T03373                                 
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
  KO
K03174  TNF receptor-associated factor 3
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04064  NF-kappa B signaling pathway
ocu04620  Toll-like receptor signaling pathway
ocu04621  NOD-like receptor signaling pathway
ocu04622  RIG-I-like receptor signaling pathway
ocu04657  IL-17 signaling pathway
ocu04668  TNF signaling pathway
ocu04936  Alcoholic liver disease
ocu05160  Hepatitis C
ocu05161  Hepatitis B
ocu05162  Measles
ocu05164  Influenza A
ocu05165  Human papillomavirus infection
ocu05167  Kaposi sarcoma-associated herpesvirus infection
ocu05168  Herpes simplex virus 1 infection
ocu05169  Epstein-Barr virus infection
ocu05171  Coronavirus disease - COVID-19
ocu05200  Pathways in cancer
ocu05203  Viral carcinogenesis
ocu05222  Small cell lung cancer
ocu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    100359083
   04668 TNF signaling pathway
    100359083
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100359083
   04657 IL-17 signaling pathway
    100359083
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100359083
   05203 Viral carcinogenesis
    100359083
  09162 Cancer: specific types
   05222 Small cell lung cancer
    100359083
  09172 Infectious disease: viral
   05161 Hepatitis B
    100359083
   05160 Hepatitis C
    100359083
   05171 Coronavirus disease - COVID-19
    100359083
   05164 Influenza A
    100359083
   05162 Measles
    100359083
   05167 Kaposi sarcoma-associated herpesvirus infection
    100359083
   05169 Epstein-Barr virus infection
    100359083
   05165 Human papillomavirus infection
    100359083
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100359083
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    100359083
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF3_RING zf-TRAF zf-C3HC4 zf-C3HC4_2 MPS2 zf-RING_UBOX Spc29 ATG16 zf-RING_5 KxDL Crescentin FliJ DUF1664 GAS LMBR1 DUF3450 T3SSipB V_ATPase_I BLOC1_2 ADIP
Other DBs
NCBI-GeneID: 100359083
NCBI-ProteinID: XP_051690822
Ensembl: ENSOCUG00000003672
LinkDB
Position
Unknown
AA seq 568 aa
MESSKKMDSPGTVQANPPLKLHPDRGAGTAVFAPEQGGYKEKFVKTVEDKYKCEKCRLVL
CNPKQTECGHRFCESCMAALLSSSSPKCTACQESIVKDKVFKDNCCKREILALQICCRNE
SRGCAEQLALGHLLVHLKNDCQFEELACVRADCKEKVLRKDLRDHVEKACKYREATCSHC
KSQVPMITLQKHEDTECPCVVVSCPHKCSVLTLLRSELSAHLSECVNAPSTCSFKRYGCV
FQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI
EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR
VTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW
KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG
EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFRKPTGEMNIASGCPVFVAQ
TVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq 1707 nt   +upstreamnt  +downstreamnt
atggagtcaagtaaaaagatggactcccctggcacagtgcaggcaaacccaccgctgaag
ctgcaccctgaccggggcgctgggacagctgttttcgcccctgagcagggaggctacaag
gagaagtttgtgaagactgtggaggacaagtacaagtgtgagaagtgccgcctggtgctg
tgcaacccgaagcagaccgagtgtgggcaccggttctgtgagagctgcatggctgccctg
ttgagctcctcaagtccgaaatgtaccgcgtgtcaagaaagcattgtgaaagacaaggtg
ttcaaggacaactgctgcaagagagagattctggcccttcagatctgctgtcggaacgag
agcagaggctgtgcggagcagttggcactggggcatctgctggtacatctaaaaaatgac
tgccagttcgaggaacttgcctgtgtgcgcgctgactgcaaagagaaggtgctgaggaag
gatctgcgcgaccatgtggagaaggcctgcaagtaccgcgaggccacgtgcagccactgc
aagagccaggtccccatgatcaccctgcagaaacacgaggacaccgagtgtccctgcgtg
gtggtgtcgtgccctcacaagtgcagcgtgctgaccctgctgaggagcgagttgagtgca
cacttgtcagagtgtgtcaatgcccccagcacctgtagttttaagcgctatggctgcgtt
tttcaggggacgaaccagcagatcaaggcccacgaggccagctcggcggtacagcacgtc
aacctgctcaaggagtggagcaactccctggagaagaaggtttccttgctgcaaaatgaa
agtgtagaaaaaaacaagagtatacaaagtctgcacaatcagatatgtagctttgaaatt
gaaattgagagacaaaaggagatgcttcgaaataatgaatccaaaatacttcatttacag
cgagtaatagacagccaagcagagaagctaaaggagctggacaaggagatccgccccttc
cggcagaactgggaggaggccgacagcatgaagagcagcgtggagtcgctccagaaccgc
gtgaccgagctggaaagtgtggacaaaagtgccgggcaggcggctcgcaacacaggcttg
ctggagtcccagctgagccggcacgaccagatgctgagcgttcatgacatccgcctggcg
gacatggacctgcgcttccaggtcctggagaccgccagctacaacggcgtgctgatctgg
aagatccgagattataagcggcggaagcaggaggccgtgatggggaagaccctgtccctt
tacagccagcctttctacacgggctattttggctataagatgtgcgccagggtctacctg
aatggggacgggatggggaaggggacacacttgtcactgttctttgtcatcatgcgtgga
gagtatgatgccttgcttccttggccgtttaagcagaaagtgacgctcatgttaatggat
caggggtcctcgcggcgccacctgggagacgcgttcaagcctgaccccaacagcagcagc
ttccggaagcccacaggggagatgaacatcgcctctggctgccccgtctttgtggcccaa
actgtcctggaaaacgggacgtatattaaagatgatacaatttttattaaagtcatagtg
gatacttcggatctgcccgacccctga

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